View conserved binding sites


Gene
PT18G09060
Description
Lysine--tRNA ligase
Alias
Potri.018G090600.1;Potri.018G090600.1;Potri.018G090600;PAC:27008829
Binding siteNameDescriptionLocationPosition
Matrix_418KNAT6;KNAT2Not availableUpstream-1812
Motif_136SEF4MOTIFGM7SSEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4)Upstream-940
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalUpstream-933
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-934
Upstream-938
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-937
Motif_425ANAC013;ANAC016;ANAC017;ANAC053;ANAC078A membrane-bound NAC transcription factor is a regulator of mitochondrial retrograde regulation involved in oxidative stress responses in Arabidopsis thalianaUpstream-297