View conserved binding sites


Gene
PT17G09200
Description
glucose 6-dehydrogenase
Alias
Potri.017G092000;PAC:26985039;Potri.017G092000.2;Potri.017G092000.2
Binding siteNameDescriptionLocationPosition
Matrix_1TOE2Not availableDownstream1500
Matrix_203GATA9;GATA12Not availableUpstream-772
Upstream-773
Matrix_242AT2G25820;AT3G16280;AT4G32800;TINY2;tnyNot availableUpstream-1017
Matrix_244DREB2CNot availableUpstream-1016
Matrix_385DEAR4Not availableUpstream-1016
Matrix_388SNZ;SMZ;TOE2Not availableDownstream1499
Matrix_394DREB_UNot availableUpstream-1016
Matrix_408GATA12Not availableUpstream-773
Upstream-774
Matrix_453EIL3Not availableDownstream1510
Matrix_478AT1G01250Not availableUpstream-1017
Matrix_73DEAR3;RAP2.9;RAP2.10Not availableUpstream-1017
Matrix_92AT1G33760Not availableUpstream-1016
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-636
Motif_193GLK1GLK transcription factors coordinate expression of the photosynthetic apparatus in ArabidopsisUpstream-537
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-156
Upstream-1841
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationUpstream-535
Upstream-807
Motif_54LTREATLTI78Putative low temperature responsive element (LTRE); Found in Arabidopsis thaliana low-temperature-induced (lti) genes, lti78 and lti65; Repeated four times in lti78 which is also known as cor78 and rd29A; Found also in barley low temperature responsive genes, blt4.2, blt4.6, blt4.9 (lipid transfer genes); cold inducible; See LTRECORE; Also present in rab18, kin1, and kin2; Differential expression of two related, low-temperature-induced genes in Arabidopsis thalianaUpstream-1016
Motif_563PYRIMIDINEBOXOSRAMY1APyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this siteDownstream1524
Motif_606NAPINMOTIFBNSequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seedsUpstream-758
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-1017
Motif_65BS1EGCCRBS1 (binding site 1) found in E. gunnii Cinnamoyl-CoA reductase (CCR) gene promoter; nuclear protein binding site; Required for vascular expressionUpstream-740
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionDownstream1520
Motif_667TATABOXOSPALBinding site for OsTBP2, found in the promoter of rice pal gene encoding phenylalanine ammonia-lyase; OsTFIIB stimulated the DNA binding and bending activities of OsTBP2 and synergistically enhanced OsTBP2-mediated transcription from the pal promoterUpstream-753
Motif_83CIACADIANLELHCRegion necessary for circadian expression of tomato Lhc geneUpstream-538