View conserved binding sites


Gene
PT13G11540
Description
Receptor-type tyrosine-protein phosphatase
Alias
Potri.013G115400;PAC:26995647;Potri.013G115400.1;Potri.013G115400.1
Binding siteNameDescriptionLocationPosition
Matrix_414AGL15Not availableIntron457
Intron427
Matrix_49FHY3/FAR1Not availableUpstream-1951
Matrix_508APL;AT3G12730;AT3G24120;UNE16Not availableUpstream-194
Matrix_69AT2G03500Not availableUpstream-194
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-32
Motif_310ANAERO3CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO3CONSENSUS by the PLACEdb curatorUpstream-27
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationDownstream3892