View conserved binding sites


Gene
PT13G11070
Description
Transcription factor TCP22
Alias
Potri.013G110700.1;Potri.013G110700.1;Potri.013G110700;PAC:26994391
Binding siteNameDescriptionLocationPosition
Matrix_269FHY3/FAR1Not availableUpstream-50
Upstream-53
Upstream-56
Upstream-59
Upstream-62
Matrix_48PINot availableUpstream-1126
Upstream-1130
Upstream-1134
Matrix_480BES1Not availableUpstream-468
Upstream-469
Matrix_502AT3G13040Not availableUpstream-306
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-351
Upstream-353
Upstream-355
Upstream-479
Motif_168IBOXI box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated geneUpstream-373
Motif_244ABRE-like binding site motifNot availableUpstream-1873
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-859
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-1875
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-351
Upstream-353
Upstream-355
Upstream-357
Upstream-359
Upstream-479
Upstream-481
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-860
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-350
Upstream-352
Upstream-354
Upstream-356
Upstream-358
Upstream-360
Upstream-362
Upstream-364
Upstream-366
Upstream-479
Upstream-481
Upstream-483
Upstream-485
Upstream-487
Upstream-489