Matrix_269 | FHY3/FAR1 | Not available | Upstream | -50 |
| | | Upstream | -53 |
| | | Upstream | -56 |
| | | Upstream | -59 |
| | | Upstream | -62 |
Matrix_48 | PI | Not available | Upstream | -1126 |
| | | Upstream | -1130 |
| | | Upstream | -1134 |
Matrix_480 | BES1 | Not available | Upstream | -468 |
| | | Upstream | -469 |
Matrix_502 | AT3G13040 | Not available | Upstream | -306 |
Motif_129 | GAGAGMGSA1 | GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNA | Upstream | -351 |
| | | Upstream | -353 |
| | | Upstream | -355 |
| | | Upstream | -479 |
Motif_168 | IBOX | I box; I-box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; I box; Binding site of LeMYB1, that is a member of a novel class of myb-like proteins; LeMYBI act as a transcriptional activator; An evolutionarily conserved protein binding sequence upstream of a plant light-regulated gene | Upstream | -373 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -1873 |
Motif_309 | GATA promoter motif | Arabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristics | Upstream | -859 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -1875 |
Motif_441 | GAGA8HVBKN3 | GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBR | Upstream | -351 |
| | | Upstream | -353 |
| | | Upstream | -355 |
| | | Upstream | -357 |
| | | Upstream | -359 |
| | | Upstream | -479 |
| | | Upstream | -481 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -860 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -350 |
| | | Upstream | -352 |
| | | Upstream | -354 |
| | | Upstream | -356 |
| | | Upstream | -358 |
| | | Upstream | -360 |
| | | Upstream | -362 |
| | | Upstream | -364 |
| | | Upstream | -366 |
| | | Upstream | -479 |
| | | Upstream | -481 |
| | | Upstream | -483 |
| | | Upstream | -485 |
| | | Upstream | -487 |
| | | Upstream | -489 |