View conserved binding sites


Gene
PT10G09330
Description
No description available
Alias
Potri.010G093300;Potri.010G093300.1;PAC:26979239;Potri.010G093300.1
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-137
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1596
Matrix_109GBF3Not availableUpstream-139
Matrix_113ABI5Not availableUpstream-137
Upstream-139
Matrix_122ABF1;AREB2Not availableUpstream-137
Matrix_129ABF1Not availableUpstream-138
Matrix_134ABF1Not availableUpstream-139
Matrix_145GBF4;AT5G44080Not availableUpstream-139
Matrix_156POC1Not availableUpstream-139
Matrix_192FHY3/FAR1Not availableUpstream-139
Matrix_194HYH;HY5Not availableUpstream-135
Matrix_214AP1Not availableUpstream-136
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-139
Matrix_264ATAREB1Not availableUpstream-135
Upstream-138
Matrix_296GBF2Not availableUpstream-139
Matrix_300bZIP68;bZIP16Not availableUpstream-139
Matrix_301PIL5Not availableUpstream-133
Upstream-139
Matrix_331GBF1Not availableUpstream-139
Matrix_332SPT;ALCNot availableUpstream-139
Upstream-1598
Matrix_338AP2Not availableUpstream-135
Matrix_356PRR5Not availableUpstream-131
Upstream-135
Matrix_369AT2G18300Not availableUpstream-1597
Matrix_403BZR1Not availableUpstream-136
Matrix_443AGL15Not availableUpstream-136
Matrix_449BIM2Not availableUpstream-1597
Matrix_480BES1Not availableUpstream-138
Upstream-1596
Matrix_488ABF1Not availableUpstream-137
Matrix_53MYC3Not availableUpstream-140
Upstream-1599
Matrix_55PIF3Not availableUpstream-137
Matrix_64PIF5Not availableUpstream-1598
Matrix_7PIF4Not availableUpstream-140
Matrix_80BIM1Not availableUpstream-1598
Motif_145MYCATERD1MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis; NAC protein bound specifically to the CATGTG motif; NAC protein bound specifically to the CATGTG motifUpstream-1176
Upstream-1213
Motif_174SREATMSDsugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in ArabidopsisUpstream-15
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-139
Upstream-1598
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-138
Motif_210REBETALGLHCB21REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulationUpstream-16
Upstream-1871
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-138
Upstream-139
Upstream-145
Motif_244ABRE-like binding site motifNot availableUpstream-137
Upstream-139
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-139
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-139
Upstream-442
Motif_447AtMYC2 BS in RD22;PIF4Binding site for MYC (rd22BP1) in Arabidopsis dehydration-resposive gene, rd22; MYC binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -200 of rd22 gene; Also MYB at ca. -141 of rd22 gene; See also MYBATRD22; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1176
Upstream-1213
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-139
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-140
Motif_57ABREOSRAB21ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em geneUpstream-1317
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-140
Motif_638ABRE binding site motifNot availableUpstream-139
Motif_641LRENPCABELRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241Upstream-140
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-14