Matrix_104 | PI | Not available | Upstream | -137 |
Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -1596 |
Matrix_109 | GBF3 | Not available | Upstream | -139 |
Matrix_113 | ABI5 | Not available | Upstream | -137 |
| | | Upstream | -139 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -137 |
Matrix_129 | ABF1 | Not available | Upstream | -138 |
Matrix_134 | ABF1 | Not available | Upstream | -139 |
Matrix_145 | GBF4;AT5G44080 | Not available | Upstream | -139 |
Matrix_156 | POC1 | Not available | Upstream | -139 |
Matrix_192 | FHY3/FAR1 | Not available | Upstream | -139 |
Matrix_194 | HYH;HY5 | Not available | Upstream | -135 |
Matrix_214 | AP1 | Not available | Upstream | -136 |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -139 |
Matrix_264 | ATAREB1 | Not available | Upstream | -135 |
| | | Upstream | -138 |
Matrix_296 | GBF2 | Not available | Upstream | -139 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -139 |
Matrix_301 | PIL5 | Not available | Upstream | -133 |
| | | Upstream | -139 |
Matrix_331 | GBF1 | Not available | Upstream | -139 |
Matrix_332 | SPT;ALC | Not available | Upstream | -139 |
| | | Upstream | -1598 |
Matrix_338 | AP2 | Not available | Upstream | -135 |
Matrix_356 | PRR5 | Not available | Upstream | -131 |
| | | Upstream | -135 |
Matrix_369 | AT2G18300 | Not available | Upstream | -1597 |
Matrix_403 | BZR1 | Not available | Upstream | -136 |
Matrix_443 | AGL15 | Not available | Upstream | -136 |
Matrix_449 | BIM2 | Not available | Upstream | -1597 |
Matrix_480 | BES1 | Not available | Upstream | -138 |
| | | Upstream | -1596 |
Matrix_488 | ABF1 | Not available | Upstream | -137 |
Matrix_53 | MYC3 | Not available | Upstream | -140 |
| | | Upstream | -1599 |
Matrix_55 | PIF3 | Not available | Upstream | -137 |
Matrix_64 | PIF5 | Not available | Upstream | -1598 |
Matrix_7 | PIF4 | Not available | Upstream | -140 |
Matrix_80 | BIM1 | Not available | Upstream | -1598 |
Motif_145 | MYCATERD1 | MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis; NAC protein bound specifically to the CATGTG motif; NAC protein bound specifically to the CATGTG motif | Upstream | -1176 |
| | | Upstream | -1213 |
Motif_174 | SREATMSD | sugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in Arabidopsis | Upstream | -15 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -139 |
| | | Upstream | -1598 |
Motif_200 | GBOXLERBCS | G box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBF | Upstream | -138 |
Motif_210 | REBETALGLHCB21 | REbeta found in Lemna gibba Lhcb21 gene promoter; Located at -114 to -109; A GATA sequence created at a position six nucleotides upstream could replace the function of REbeta; Required for phytochrome regulation | Upstream | -16 |
| | | Upstream | -1871 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -138 |
| | | Upstream | -139 |
| | | Upstream | -145 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -137 |
| | | Upstream | -139 |
Motif_291 | ABFs binding site motif | Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element | Upstream | -139 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -139 |
| | | Upstream | -442 |
Motif_447 | AtMYC2 BS in RD22;PIF4 | Binding site for MYC (rd22BP1) in Arabidopsis dehydration-resposive gene, rd22; MYC binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -200 of rd22 gene; Also MYB at ca. -141 of rd22 gene; See also MYBATRD22; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -1176 |
| | | Upstream | -1213 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -139 |
Motif_558 | BOXIIPCCHS | Core of Box II/G box found in the parsley chs genes; Essential for light regulation | Upstream | -140 |
Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -1317 |
Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | Upstream | -140 |
Motif_638 | ABRE binding site motif | Not available | Upstream | -139 |
Motif_641 | LRENPCABE | LRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241 | Upstream | -140 |
Motif_658 | GT1CONSENSUS | Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression | Upstream | -14 |