Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -520 |
| | | Upstream | -422 |
Matrix_113 | ABI5 | Not available | Upstream | -518 |
Matrix_120 | BEE2 | Not available | Upstream | -519 |
Matrix_133 | DYT1 | Not available | Upstream | -524 |
Matrix_14 | ZCW32;AT5G62610 | Not available | Upstream | -518 |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -523 |
Matrix_153 | AP2 | Not available | Upstream | -520 |
| | | Upstream | -422 |
| | | Downstream | 1650 |
Matrix_156 | POC1 | Not available | Upstream | -520 |
Matrix_158 | AT1G03040;LRL1;UNE12;LRL2;LRL3 | Not available | Upstream | -519 |
Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -519 |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -518 |
Matrix_24 | POC1 | Not available | Upstream | -523 |
Matrix_264 | ATAREB1 | Not available | Upstream | -519 |
Matrix_301 | PIL5 | Not available | Upstream | -518 |
Matrix_323 | BIM3 | Not available | Upstream | -519 |
Matrix_330 | MYC2;TT8 | Not available | Upstream | -519 |
Matrix_338 | AP2 | Not available | Upstream | -522 |
Matrix_339 | bHLH104 | Not available | Upstream | -519 |
Matrix_356 | PRR5 | Not available | Upstream | -526 |
Matrix_365 | AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1 | Not available | Upstream | -518 |
Matrix_369 | AT2G18300 | Not available | Upstream | -521 |
| | | Upstream | -519 |
Matrix_389 | ILR3 | Not available | Upstream | -519 |
Matrix_393 | REM1 | Not available | Upstream | -930 |
Matrix_403 | BZR1 | Not available | Upstream | -521 |
Matrix_432 | AT1G77920 | Not available | Upstream | -515 |
Matrix_449 | BIM2 | Not available | Upstream | -519 |
Matrix_465 | MYC4 | Not available | Upstream | -519 |
Matrix_480 | BES1 | Not available | Upstream | -519 |
Matrix_488 | ABF1 | Not available | Upstream | -527 |
Matrix_514 | DYT1 | Regulation of the Arabidopsis anther transcriptome by DYT1 for pollen development | Upstream | -521 |
Matrix_53 | MYC3 | Not available | Upstream | -521 |
Matrix_55 | PIF3 | Not available | Upstream | -422 |
Matrix_64 | PIF5 | Not available | Upstream | -518 |
Matrix_7 | PIF4 | Not available | Upstream | -519 |
Matrix_77 | PRR5 | Not available | Upstream | -521 |
Matrix_80 | BIM1 | Not available | Upstream | -518 |
Motif_139 | RHERPATEXPA7 | Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patterns | Upstream | -529 |
| | | Upstream | -518 |
| | | Upstream | -516 |
Motif_145 | MYCATERD1 | MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis; NAC protein bound specifically to the CATGTG motif; NAC protein bound specifically to the CATGTG motif | Upstream | -419 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -517 |
Motif_194 | EBOXBNNAPA | E-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1 | Upstream | -517 |
| | | Upstream | -419 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -518 |
Motif_256 | RHE_element | Functional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution Patterns | Upstream | -522 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -517 |
Motif_447 | AtMYC2 BS in RD22;PIF4 | Binding site for MYC (rd22BP1) in Arabidopsis dehydration-resposive gene, rd22; MYC binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -200 of rd22 gene; Also MYB at ca. -141 of rd22 gene; See also MYBATRD22; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -419 |
Motif_469 | QELEMENTZMZM13 | Q(quantitative)-element in maize ZM13 gene promoter; Found at -107 to -102; Involved in expression enhancing activity; ZM13 is a maize homolog of tomato LAT52 gene; ZM13 is a pollen-specific maize gene | Upstream | -278 |
Motif_48 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -284 |
Motif_567 | T/GBOXATPIN2 | T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motif | Upstream | -528 |