View conserved binding sites


Gene
PT09G00590
Description
DNA ligase 1
Alias
Potri.009G005900.1;Potri.009G005900.1;PAC:26987561;Potri.009G005900
Binding siteNameDescriptionLocationPosition
Matrix_272DEAR4Not availableUpstream-222
Matrix_36RAV1_1RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plantsIntron643
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-192