View conserved binding sites


Gene
PT03G11340
Description
Stress-induced-phosphoprotein 1
Alias
Potri.003G113400.1;Potri.003G113400.1;PAC:26998620;Potri.003G113400
Binding siteNameDescriptionLocationPosition
Matrix_165KNAT1Not availableUpstream-213
Matrix_256IXR11;KNAT5;KNAT4;KNAT3Not availableUpstream-214
Matrix_269FHY3/FAR1Not availableUpstream-134
Upstream-104
Matrix_399TGA1Not availableUpstream-214
Matrix_414AGL15Not availableUpstream-143
Matrix_418KNAT6;KNAT2Not availableUpstream-214
Motif_184PROXBBNNAPAprox B (proximal portion of B-box) found in napA gene of Brassica napus; CA-rich sequence; Found between -130 and -124; Required for seed specific expression and ABA responsiveness; dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABREUpstream-205
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-207
Motif_419MYB4 binding site motifNot availableUpstream-207
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-208
Motif_6492SSEEDPROTBANAPAConserved in many storage-protein gene promoters; May be important for high activity of the napA promoterUpstream-205
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-86
Motif_666MYB binding site promoterA flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genesUpstream-208
Motif_70CANBNNAPACore of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressorUpstream-205