View conserved binding sites


Gene
PT03G06810
Description
Nucleoside diphosphate kinase
Alias
Potri.003G068100.1;Potri.003G068100.1;Potri.003G068100;PAC:26998074
Binding siteNameDescriptionLocationPosition
Matrix_132SOC1Not availableIntron173
Motif_226E2F1OSPCNAre2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissueUpstream-177
Motif_372E2FATE2F-binding site found in many potential E2F target genes; most potential E2F targets identified in silico show a cell cycle-regulated expressionUpstream-177
Motif_404AACACOREOSGLUB1Core of AACA motifs found in rice glutelin genes, involved in controlling the endosperm-specific expression; AACA is also closely associated with the GCN4 motif in all rice glutelin genes and together have been shown to confer endosperm-specific enhancement to the truncated -90 CaMV 35S promoterUpstream-144
Motif_410ANAERO1CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curatorUpstream-143
Motif_419MYB4 binding site motifNot availableUpstream-144
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-177
Motif_609AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-143
Motif_663E2F binding site motif;E2F/DP BS in AtCDC6Not availableUpstream-177
Motif_672AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-143