View conserved binding sites


Gene
PT01G34380
Description
NAC domain-containing protein 8
Alias
Potri.001G343800.1;PAC:27044277;Potri.001G343800;Potri.001G343800.1
Binding siteNameDescriptionLocationPosition
Matrix_117ANTNot availableUpstream-164
Upstream-301
Matrix_196TCP20;AT5G41030Not availableUpstream-229
Matrix_202WRKY71;WRKY28;WRKY8Not availableUpstream-241
Upstream-242
Matrix_232TCP23Not availableUpstream-229
Upstream-230
Matrix_250ADAP;AT1G79700;WRI1;ANTNot availableUpstream-161
Upstream-297
Matrix_270ANTDNA binding properties of the Arabidopsis floral development protein AINTEGUMENTAUpstream-163
Upstream-300
Matrix_297TCP15Not availableUpstream-229
Upstream-230
Matrix_348AT5G51910Not availableUpstream-230
Upstream-231
Matrix_367REM1Not availableUpstream-310
Matrix_376WRKY45Not availableUpstream-240
Upstream-241
Matrix_42AT2G45680Not availableUpstream-230
Upstream-231
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-135
Motif_125BOXIINTPATPBBox II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoterUpstream-368
Motif_136SEF4MOTIFGM7SSEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4)Upstream-975
Motif_226E2F1OSPCNAre2f-1 found in the promoter of rice PCNA gene; Located between -142 and -135; te2f-1 found in the promote of Tobacco PCBA gene; Located between -122 and -115; Binding site of OsE2F1 and OsE2F2; Involved in transcriptional activation in actively dividing cells and tissueUpstream-129
Motif_235C8GCARGATBinding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15)Upstream-276
Motif_262WRKY70Identification of a novel type of WRKY transcription factor binding site in elicitor-responsive cis-sequences from Arabidopsis thalianaUpstream-281
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalUpstream-750
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-523
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-751
Motif_425ANAC013;ANAC016;ANAC017;ANAC053;ANAC078A membrane-bound NAC transcription factor is a regulator of mitochondrial retrograde regulation involved in oxidative stress responses in Arabidopsis thalianaUpstream-350
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-129
Upstream-610
Motif_517LEAFYATAGTarget sequence of LEAFY in the intron of AGAMOUS gene in ArabidopsisUpstream-300
Motif_626ACGTTBOXT-box according to the nomenclature of ACGT elements; One of ACGT elements; See also ACGTABOX,ACGTCBOX, and CACGTGMOTIFUpstream-239
Motif_65BS1EGCCRBS1 (binding site 1) found in E. gunnii Cinnamoyl-CoA reductase (CCR) gene promoter; nuclear protein binding site; Required for vascular expressionUpstream-128
Upstream-633
Motif_651E2Fc;E2Fd;E2Fe;E2FaThe E2F family of transcription factors from Arabidopsis thaliana. Novel and conserved components of the retinoblastoma/E2F pathway in plantsUpstream-128
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-132
Upstream-324
Motif_663E2F binding site motif;E2F/DP BS in AtCDC6Not availableUpstream-129
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-5
Upstream-84