View conserved binding sites


Gene
PPE_006G33940
Description
Acyl carrier protein 1, chloroplastic
Alias
ppa013030m.g;ppa013030m;PAC:17651290;ppa013030m
Binding siteNameDescriptionLocationPosition
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-186
Upstream-188
Upstream-190
Upstream-192
Upstream-194
Upstream-196
Upstream-198
Motif_153MARABOX1A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR)Upstream-353
Upstream-1231
Motif_235C8GCARGATBinding site of plant MADS-domain protein AGL15; CArG motif with a longer A/T-rich core;A variant of CArG motif, with a longer A/T-rich core; Binding site for AGL15 (AGAMOUS-like 15)Upstream-465
Upstream-837
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-186
Upstream-188
Upstream-190
Upstream-192
Upstream-194
Upstream-196
Upstream-198
Upstream-200
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-185
Upstream-187
Upstream-189
Upstream-191
Upstream-193
Upstream-195
Upstream-197
Upstream-199
Upstream-201
Upstream-203
Upstream-205
Upstream-207