View conserved binding sites


Gene
PPE_006G33400
Description
H2 finger protein ATL11
Alias
ppa008615m.g;ppa008615m;PAC:17665866;ppa008615m
Binding siteNameDescriptionLocationPosition
Matrix_109GBF3Not availableUpstream-447
Upstream-448
Matrix_128TGA2Not availableUpstream-417
Upstream-418
Upstream-419
Matrix_139OBF5Not availableUpstream-417
Upstream-418
Matrix_166TGA4Not availableUpstream-417
Upstream-418
Upstream-419
Matrix_192FHY3/FAR1Not availableUpstream-445
Upstream-446
Matrix_196TCP20;AT5G41030Not availableUpstream-361
Matrix_206CUC1;ANAC100Not availableUpstream-440
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-445
Upstream-446
Matrix_228TGA2Not availableUpstream-417
Upstream-418
Matrix_232TCP23Not availableUpstream-360
Matrix_24POC1Not availableUpstream-445
Matrix_257NAC050;ANAC051;anac057;NAC2Not availableUpstream-440
Matrix_282bZIP60Not availableUpstream-417
Upstream-418
Matrix_296GBF2Not availableUpstream-448
Upstream-449
Matrix_297TCP15Not availableUpstream-360
Matrix_300bZIP68;bZIP16Not availableUpstream-448
Upstream-449
Matrix_305PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-447
Matrix_311TGA1Not availableUpstream-417
Upstream-418
Upstream-419
Matrix_331GBF1Not availableUpstream-447
Upstream-448
Matrix_335HSFB2ANot availableUpstream-1382
Upstream-1383
Matrix_340HSFC1Not availableUpstream-1382
Upstream-1383
Matrix_345POC1Not availableUpstream-445
Matrix_348AT5G51910Not availableUpstream-359
Matrix_399TGA1Not availableUpstream-418
Matrix_41anac058Not availableUpstream-440
Matrix_419TGA9;PAN;TGA6;bZIP65Not availableUpstream-417
Upstream-418
Upstream-419
Matrix_420ANAC58Not availableUpstream-441
Matrix_432AT1G77920Not availableUpstream-417
Upstream-418
Upstream-419
Matrix_457TGA2Not availableUpstream-419
Upstream-420
Matrix_488ABF1Not availableUpstream-440
Matrix_56BZIP17;BZIP28;BZIP49Not availableUpstream-449
Motif_244ABRE-like binding site motifNot availableUpstream-448
Motif_33ACGTCBOXC-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding siteUpstream-419
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-450
Motif_437ANAERO2CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1)Upstream-425
Motif_453HEXMOTIFTAH3H4hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding siteUpstream-418
Upstream-420
Motif_525CRTDREHVCBF2Preferred sequence for AP2 transcriptional activator HvCBF2 of barley; Core CRT/DRE motif; HvCBF2 bound to a (G/a)(T/c)CGAC core motif; DNA binding is regulated by temperatureUpstream-453
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-448
Motif_576TGACGTVMAMYTGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seedsUpstream-418
Upstream-420
Motif_583AtbZIP1The arabidopsis bZIP1 transcription factor is involved in sugar signaling, protein networking, and DNA bindingUpstream-418
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-453
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-448
Motif_641LRENPCABELRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241Upstream-447
Motif_685PALINDROMICCBOXGMPalindromic C-box in soybean;bZIP factors, STGA1 and STFs (STF1 and STF2) found in soybean apical hypocotyl, bind to this sequenceUpstream-418
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-248
Upstream-250
Upstream-252
Upstream-254