View conserved binding sites


Gene
PPE_006G07930
Description
No description available
Alias
ppa013012m.g;ppa013012m;PAC:17657039;ppa013012m
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-164
Upstream-1114
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1139
Matrix_113ABI5Not availableUpstream-163
Upstream-164
Upstream-1116
Matrix_122ABF1;AREB2Not availableUpstream-163
Upstream-164
Upstream-1114
Upstream-1115
Matrix_129ABF1Not availableUpstream-164
Upstream-165
Upstream-1115
Matrix_134ABF1Not availableUpstream-165
Upstream-166
Upstream-1116
Matrix_145GBF4;AT5G44080Not availableUpstream-165
Upstream-166
Matrix_192FHY3/FAR1Not availableUpstream-161
Upstream-162
Upstream-1116
Matrix_194HYH;HY5Not availableUpstream-162
Matrix_214AP1Not availableUpstream-163
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-133
Matrix_251PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-164
Matrix_264ATAREB1Not availableUpstream-161
Upstream-162
Upstream-1112
Upstream-1115
Matrix_296GBF2Not availableUpstream-164
Upstream-165
Matrix_300bZIP68;bZIP16Not availableUpstream-164
Upstream-165
Matrix_301PIL5Not availableUpstream-159
Upstream-160
Upstream-1135
Matrix_338AP2Not availableUpstream-162
Upstream-1112
Matrix_356PRR5Not availableUpstream-162
Upstream-1108
Matrix_403BZR1Not availableUpstream-163
Upstream-1113
Matrix_443AGL15Not availableUpstream-163
Upstream-1113
Matrix_480BES1Not availableUpstream-1115
Matrix_53MYC3Not availableUpstream-1142
Matrix_77PRR5Not availableUpstream-163
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-1036
Upstream-1140
Upstream-1142
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-166
Upstream-1116
Upstream-1141
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-166
Upstream-1116
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-66
Upstream-67
Upstream-165
Upstream-166
Upstream-1115
Upstream-1116
Upstream-1141
Motif_244ABRE-like binding site motifNot availableUpstream-133
Upstream-164
Upstream-166
Upstream-1011
Upstream-1116
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemUpstream-165
Upstream-183
Upstream-1115
Upstream-1116
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-133
Upstream-166
Upstream-1011
Upstream-1116
Upstream-1141
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-166
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-1114
Upstream-1143
Motif_498SGBFGMGMAUX28bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoterUpstream-164
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-134
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-134
Upstream-164
Upstream-1117
Motif_638ABRE binding site motifNot availableUpstream-133
Motif_640RYREPEATBNNAPARY repeat found in RY/G box (the complex containing the two RY repeats and the G-box) of napA gene in Brassica napus; Found between -78 and -50; Required for seed specific expression;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABREUpstream-125
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-164
Upstream-1117
Motif_92ABREATRD22ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22Upstream-132