View conserved binding sites


Gene
PPE_005G23370
Description
Tubulin beta
Alias
ppa005674m.g;ppa005674m;PAC:17647033;ppa005674m
Binding siteNameDescriptionLocationPosition
Matrix_463HAT3.1Not availableUpstream-1741
Matrix_5AT5G51190;ERF104Not availableUpstream-246
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-148
Motif_193GLK1GLK transcription factors coordinate expression of the photosynthetic apparatus in ArabidopsisUpstream-158
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-219
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-252
Upstream-151
Upstream-148
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-148
Motif_411PRECONSCRHSP70AConsensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and lightUpstream-745
Motif_419MYB4 binding site motifNot availableUpstream-227
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-688
Upstream-687
Upstream-686
Upstream-685
Upstream-684
Upstream-683
Upstream-682