View conserved binding sites


Gene
PPE_002G29880
Description
Putative RING-H2 finger protein ATL21B
Alias
ppa024723m.g;ppa024723m;PAC:17665333;ppa024723m
Binding siteNameDescriptionLocationPosition
Matrix_207WRKY10;WRKY57;AT2G44745;ATWRKY13;WRKY49Not availableIntron1703
Matrix_316WRKY15;WRKY39;WRKY7;WRKY74Not availableIntron1718
Matrix_500WRKY43Not availableIntron1718
Motif_309GATA promoter motifArabidopsis thaliana GATA factors: organisation, expression and DNA-binding characteristicsUpstream-446
Motif_437ANAERO2CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1)Upstream-454
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-447