View conserved binding sites


Gene
PPE_002G13000
Description
No description available
Alias
ppa021810m.g;ppa021810m;PAC:17643424;ppa021810m
Binding siteNameDescriptionLocationPosition
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-631
Matrix_109GBF3Not availableUpstream-631
Matrix_113ABI5Not availableUpstream-631
Matrix_122ABF1;AREB2Not availableUpstream-632
Matrix_14ZCW32;AT5G62610Not availableUpstream-632
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-628
Matrix_153AP2Not availableUpstream-631
Matrix_156POC1Not availableUpstream-631
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-632
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-632
Matrix_24POC1Not availableUpstream-628
Matrix_301PIL5Not availableUpstream-627
Matrix_323BIM3Not availableUpstream-632
Matrix_332SPT;ALCNot availableUpstream-632
Matrix_338AP2Not availableUpstream-518
Matrix_339bHLH104Not availableUpstream-632
Matrix_365AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1Not availableUpstream-633
Matrix_369AT2G18300Not availableUpstream-632
Matrix_389ILR3Not availableUpstream-632
Matrix_427ZAT14Not availableUpstream-833
Matrix_476bHLH115;bHLH34Not availableUpstream-633
Matrix_480BES1Not availableUpstream-631
Matrix_53MYC3Not availableUpstream-634
Matrix_55PIF3Not availableUpstream-631
Matrix_7PIF4Not availableUpstream-632
Matrix_77PRR5Not availableUpstream-631
Matrix_80BIM1Not availableUpstream-631
Upstream-633
Motif_104CAREOSREP1CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-709
Motif_163BOXCPSAS1Box C in pea (P.s.) asparagine synthetase (AS1) gene; Found at -45; AS1 is negatively regulated by light; Box C binds with nuclear proteins, which was competed by a putative repressor element RE1Upstream-685
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-633
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-560
Upstream-632
Upstream-633
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-558
Upstream-560
Motif_351GARE1OSREP1Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-381
Motif_552MRE1MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1Upstream-835
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-631
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-307