View conserved binding sites


Gene
PPE_001G58690
Description
Glucose-6-phosphate isomerase
Alias
ppa002932m.g;ppa002932m;PAC:17666811;ppa002932m
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-125
Upstream-126
Upstream-299
Matrix_146ORA47Not availableUpstream-125
Upstream-126
Matrix_147ERF3;AT1G80580Not availableUpstream-125
Upstream-126
Upstream-299
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-300
Matrix_190ATERF1Not availableUpstream-125
Upstream-126
Matrix_224ERF1Not availableUpstream-125
Matrix_234RAP2.3Not availableUpstream-125
Upstream-126
Matrix_261ATERF-1Not availableUpstream-125
Upstream-126
Matrix_272DEAR4Not availableUpstream-125
Upstream-126
Matrix_287ERF2Not availableUpstream-125
Upstream-126
Matrix_288RAP2.3Not availableUpstream-298
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-125
Matrix_343AT2G33710Not availableUpstream-125
Upstream-126
Upstream-299
Matrix_344ATERF15;AT4G18450Not availableUpstream-125
Upstream-126
Matrix_355ERF10;ERF11Not availableUpstream-125
Upstream-298
Matrix_360ORA59Not availableUpstream-125
Upstream-126
Matrix_363RAP2.3Not availableUpstream-298
Matrix_374AT5G07580;AT5G61590Not availableUpstream-299
Matrix_406ATERF-7Not availableUpstream-124
Matrix_409DEAR3Not availableUpstream-125
Matrix_426CRF1;CRF2Not availableUpstream-126
Upstream-127
Matrix_45DRNNot availableUpstream-125
Upstream-126
Upstream-299
Matrix_462ATERF-8Not availableUpstream-124
Matrix_484ATERF13Not availableUpstream-125
Matrix_493AT1G22985;AT1G71130Not availableUpstream-125
Upstream-126
Upstream-299
Matrix_50ATERF14;AT5G43410Not availableUpstream-125
Matrix_506DRNL;ATERF-4Not availableUpstream-126
Upstream-127
Matrix_517ERF12Not availableUpstream-125
Upstream-126
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-126
Upstream-127
Matrix_91CRF3Not availableUpstream-125
Upstream-126
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-157
Motif_193GLK1GLK transcription factors coordinate expression of the photosynthetic apparatus in ArabidopsisUpstream-153
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-157
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-157
Upstream-829
Motif_305SP1SV40SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)Upstream-125
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-126
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationUpstream-155
Motif_419MYB4 binding site motifNot availableUpstream-157
Motif_426MYB58;MYB63MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in ArabidopsisUpstream-157
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-157
Motif_531AP2SV40AP-2 binding site in enhancer regions of SV40 and human metallothionein IIA (hMT IIA)Intron1849
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionIntron1716
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionIntron1716