View conserved binding sites


Gene
PPE_001G57320
Description
Tubulin alpha
Alias
ppa005617m.g;ppa005617m;PAC:17664214;ppa005617m
Binding siteNameDescriptionLocationPosition
Matrix_110ATABI4;AT3G57600Not availableUpstream-69
Upstream-70
Matrix_147ERF3;AT1G80580Not availableUpstream-71
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-409
Matrix_269FHY3/FAR1Not availableUpstream-53
Matrix_272DEAR4Not availableUpstream-71
Matrix_336AT5G08520Not availableUpstream-16
Matrix_360ORA59Not availableUpstream-71
Matrix_39AP1Not availableUpstream-54
Matrix_406ATERF-7Not availableUpstream-69
Matrix_426CRF1;CRF2Not availableUpstream-72
Matrix_45DRNNot availableUpstream-71
Matrix_462ATERF-8Not availableUpstream-69
Matrix_48PINot availableUpstream-56
Matrix_484ATERF13Not availableUpstream-71
Matrix_50ATERF14;AT5G43410Not availableUpstream-70
Matrix_506DRNL;ATERF-4Not availableUpstream-72
Matrix_517ERF12Not availableUpstream-71
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-72
Motif_1GT1CORECritical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complexUpstream-195
Upstream-751
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-72
Motif_323MYB1LEPRTomato Pti4(ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1(GTTAGTT), G box (CACGTG))Upstream-166
Motif_375ERELEE4ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter regionUpstream-284
Upstream-313
Upstream-1436
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-79