View conserved binding sites


Gene
PPE_001G55130
Description
small subunit methyltransferase A
Alias
ppa008082m.g;ppa008082m;PAC:17660540;ppa008082m
Binding siteNameDescriptionLocationPosition
Matrix_269FHY3/FAR1Not availableUpstream-364
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-392
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-1226
Upstream-1224
Upstream-1222
Upstream-1220
Upstream-1218
Upstream-1216
Upstream-1214
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-1226
Upstream-1224
Upstream-1222
Upstream-1220
Upstream-1218
Upstream-1216
Upstream-1214
Upstream-1212
Motif_459SORLIP1Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-404
Motif_549TBF1The HSF-like transcription factor TBF1 is a major molecular switch for plant growth-to-defense transitionUpstream-364
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-1226
Upstream-1224
Upstream-1222
Upstream-1220
Upstream-1218
Upstream-1216
Upstream-1214
Upstream-1212
Upstream-1210
Upstream-1208
Upstream-1206
Upstream-1204
Motif_94UP1ATMSDUp1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-503