View conserved binding sites


Gene
PPE_001G54720
Description
emp24 domain-containing protein p24delta3
Alias
ppa011369m.g;ppa011369m;PAC:17650373;ppa011369m
Binding siteNameDescriptionLocationPosition
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-40
Upstream-38
Upstream-36
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-40
Upstream-38
Upstream-36
Upstream-34
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-41
Upstream-39
Upstream-37
Upstream-35
Upstream-33
Upstream-31
Upstream-29
Upstream-27