Matrix_108 | PIF4 | Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -725 |
Matrix_109 | GBF3 | Not available | Upstream | -727 |
Matrix_113 | ABI5 | Not available | Upstream | -727 |
Matrix_118 | PIF3_2 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -723 |
Matrix_120 | BEE2 | Not available | Upstream | -726 |
Matrix_122 | ABF1;AREB2 | Not available | Upstream | -726 |
Matrix_129 | ABF1 | Not available | Upstream | -726 |
Matrix_14 | ZCW32;AT5G62610 | Not available | Upstream | -726 |
| | | Upstream | -727 |
Matrix_15 | PIF3_1 | Direct targeting of light signals to a promoter element-bound transcription factor | Upstream | -722 |
Matrix_156 | POC1 | Not available | Upstream | -727 |
Matrix_158 | AT1G03040;LRL1;UNE12;LRL2;LRL3 | Not available | Upstream | -726 |
Matrix_194 | HYH;HY5 | Not available | Upstream | -723 |
Matrix_200 | PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815 | Not available | Upstream | -726 |
Matrix_217 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -727 |
Matrix_24 | POC1 | Not available | Upstream | -722 |
| | | Upstream | -1549 |
Matrix_247 | PIF3 | Not available | Upstream | -726 |
Matrix_296 | GBF2 | Not available | Upstream | -727 |
Matrix_300 | bZIP68;bZIP16 | Not available | Upstream | -727 |
Matrix_301 | PIL5 | Not available | Upstream | -721 |
Matrix_323 | BIM3 | Not available | Upstream | -726 |
Matrix_330 | MYC2;TT8 | Not available | Upstream | -726 |
Matrix_331 | GBF1 | Not available | Upstream | -727 |
Matrix_332 | SPT;ALC | Not available | Upstream | -727 |
Matrix_338 | AP2 | Not available | Upstream | -723 |
Matrix_339 | bHLH104 | Not available | Upstream | -726 |
Matrix_345 | POC1 | Not available | Upstream | -723 |
Matrix_369 | AT2G18300 | Not available | Upstream | -724 |
| | | Upstream | -726 |
Matrix_389 | ILR3 | Not available | Upstream | -726 |
Matrix_403 | BZR1 | Not available | Upstream | -724 |
Matrix_443 | AGL15 | Not available | Upstream | -724 |
Matrix_449 | BIM2 | Not available | Upstream | -726 |
Matrix_480 | BES1 | Not available | Upstream | -726 |
Matrix_488 | ABF1 | Not available | Upstream | -718 |
Matrix_55 | PIF3 | Not available | Upstream | -725 |
Matrix_60 | AT1G01260;AT5G57150 | Not available | Upstream | -727 |
Matrix_7 | PIF4 | Not available | Upstream | -726 |
| | | Upstream | -728 |
Matrix_77 | PRR5 | Not available | Upstream | -724 |
Matrix_80 | BIM1 | Not available | Upstream | -725 |
| | | Upstream | -727 |
Motif_125 | BOXIINTPATPB | Box II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoter | Upstream | -113 |
Motif_145 | MYCATERD1 | MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis; NAC protein bound specifically to the CATGTG motif; NAC protein bound specifically to the CATGTG motif | Upstream | -590 |
| | | Upstream | -875 |
| | | Upstream | -1554 |
Motif_179 | CACGTGMOTIF;BES1;PIF4;PIF5 | Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -727 |
Motif_218 | ABRERATCAL | ABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABRE | Upstream | -726 |
| | | Upstream | -727 |
Motif_244 | ABRE-like binding site motif | Not available | Upstream | -727 |
Motif_291 | ABFs binding site motif | Binding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response element | Upstream | -727 |
Motif_339 | ABRE-like binding site motif | Molecular responses to dehydration and low temperature | Upstream | -523 |
| | | Upstream | -727 |
| | | Upstream | -1424 |
Motif_447 | AtMYC2 BS in RD22;PIF4 | Binding site for MYC (rd22BP1) in Arabidopsis dehydration-resposive gene, rd22; MYC binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -200 of rd22 gene; Also MYB at ca. -141 of rd22 gene; See also MYBATRD22; Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses | Upstream | -590 |
| | | Upstream | -875 |
| | | Upstream | -1554 |
Motif_448 | IRO2OS | OsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiency | Upstream | -727 |
Motif_503 | EECCRCAH1 | EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1 | Upstream | -109 |
Motif_558 | BOXIIPCCHS | Core of Box II/G box found in the parsley chs genes; Essential for light regulation | Upstream | -728 |
Motif_57 | ABREOSRAB21 | ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em gene | Upstream | -728 |
Motif_627 | ACGTABREMOTIFA2OSEM | Experimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in Arabidopsis | Upstream | -728 |
Motif_638 | ABRE binding site motif | Not available | Upstream | -727 |
Motif_94 | UP1ATMSD | Up1 motif found in 162 of the 1184 up-regulated genes after main stem decapitation in Arabidopsis | Upstream | -186 |