View conserved binding sites


Gene
PPE_001G16680
Description
No description available
Alias
ppa023055m.g;ppa023055m;PAC:17659390;ppa023055m
Binding siteNameDescriptionLocationPosition
Matrix_224ERF1Not availableUpstream-1007
Matrix_234RAP2.3Not availableUpstream-1006
Matrix_252RAP2.6Not availableUpstream-1003
Matrix_295ERF1Not availableUpstream-1006
Matrix_343AT2G33710Not availableUpstream-1006
Matrix_378ATERF1Not availableUpstream-1006
Matrix_473RRTF1Not availableUpstream-1006
Matrix_50ATERF14;AT5G43410Not availableUpstream-1007
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-458
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-115
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-115