View conserved binding sites


Gene
GM19G10300
Description
ribonucleoprotein A1, A2/B1 homolog
Alias
Glyma19g10300;Glyma19g10300.1;PAC:26325958;Glyma19g10300.1
Binding siteNameDescriptionLocationPosition
Matrix_396AP3Not availableUpstream-116
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Downstream4119
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-117
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-143
Upstream-525
Upstream-958
Motif_642SEF1MOTIFSEF1 (soybean embryo factor 1) binding motif; sequence found in 5'-upstream region (-640; -765) of soybean beta-conglicinin (7S globulin) geneUpstream-434
Upstream-540
Upstream-695