View conserved binding sites


Gene
GM17G37541
Description
3-isopropylmalate dehydratase large subunit
Alias
Glyma17g37541;Glyma17g37541.1;PAC:26312218;Glyma17g37541.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-160
Matrix_110ATABI4;AT3G57600Not availableUpstream-159
Matrix_119RRTF1Not availableUpstream-161
Upstream-187
Matrix_138RRTF1Not availableUpstream-161
Matrix_146ORA47Not availableUpstream-157
Upstream-160
Matrix_147ERF3;AT1G80580Not availableUpstream-162
Matrix_190ATERF1Not availableUpstream-159
Matrix_206CUC1;ANAC100Not availableUpstream-90
Matrix_224ERF1Not availableUpstream-158
Upstream-161
Matrix_234RAP2.3Not availableUpstream-160
Matrix_243RAP2.12;RAP2.2Not availableUpstream-161
Matrix_252RAP2.6Not availableUpstream-157
Upstream-160
Matrix_261ATERF-1Not availableUpstream-161
Matrix_272DEAR4Not availableUpstream-160
Matrix_277RAP2.6Not availableUpstream-161
Matrix_287ERF2Not availableUpstream-160
Matrix_288RAP2.3Not availableUpstream-161
Matrix_295ERF1Not availableUpstream-162
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-161
Matrix_334AT3G23230Not availableUpstream-161
Matrix_343AT2G33710Not availableUpstream-160
Matrix_355ERF10;ERF11Not availableUpstream-161
Matrix_360ORA59Not availableUpstream-162
Matrix_363RAP2.3Not availableUpstream-161
Matrix_374AT5G07580;AT5G61590Not availableUpstream-161
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-161
Matrix_378ATERF1Not availableUpstream-157
Upstream-160
Matrix_406ATERF-7Not availableUpstream-162
Matrix_409DEAR3Not availableUpstream-158
Upstream-161
Matrix_41anac058Not availableUpstream-90
Matrix_415WRKY27Not availableIntron9571
Matrix_420ANAC58Not availableUpstream-91
Matrix_426CRF1;CRF2Not availableUpstream-161
Matrix_44CUC3;anac046;NAC3;ANAC087;ATNAC6;CUC2Not availableUpstream-91
Matrix_45DRNNot availableUpstream-162
Matrix_462ATERF-8Not availableUpstream-162
Matrix_473RRTF1Not availableUpstream-160
Matrix_484ATERF13Not availableUpstream-162
Matrix_488ABF1Not availableUpstream-254
Matrix_493AT1G22985;AT1G71130Not availableUpstream-161
Matrix_50ATERF14;AT5G43410Not availableUpstream-161
Matrix_506DRNL;ATERF-4Not availableUpstream-161
Matrix_517ERF12Not availableUpstream-162
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-158
Upstream-161
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-161
Matrix_91CRF3Not availableUpstream-161
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-676
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-226
Upstream-239
Upstream-240
Upstream-850
Upstream-1855
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalDownstream11345
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-162
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-226