View conserved binding sites


Gene
GM17G35650
Description
Probable isoaspartyl peptidase/L-asparaginase 2
Alias
Glyma17g35650;Glyma17g35650.1;PAC:26311698;Glyma17g35650.1
Binding siteNameDescriptionLocationPosition
Matrix_1TOE2Not availableUpstream-100
Matrix_224ERF1Not availableUpstream-151
Matrix_295ERF1Not availableUpstream-152
Matrix_321HRDNot availableUpstream-151
Matrix_343AT2G33710Not availableUpstream-150
Matrix_388SNZ;SMZ;TOE2Not availableUpstream-101
Matrix_406ATERF-7Not availableUpstream-152
Matrix_422TOE1Not availableUpstream-100
Matrix_473RRTF1Not availableUpstream-150
Motif_233DRE1COREZMRAB17DRE1 core found in maize rab17 gene promoter; DRE1 was protected, in in vivo footprinting, by a protein in embryos specifically, but in leaves, was protected when was treated with ABA and drought; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-685
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-19
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-152
Motif_570POLASIG2PolyA signal; poly A signal found in rice alpha-amylase; -10 to -30 in the case of animal genesUpstream-289
Upstream-434
Upstream-478
Upstream-515
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-4
Upstream-6
Upstream-8