View conserved binding sites


Gene
GM16G19180
Description
Phospholipid-transporting ATPase
Alias
Glyma16g19180;Glyma16g19180.2;PAC:26352503;Glyma16g19180.2
Binding siteNameDescriptionLocationPosition
Matrix_119RRTF1Not availableUpstream-1443
Matrix_138RRTF1Not availableUpstream-1443
Matrix_146ORA47Not availableUpstream-1442
Matrix_147ERF3;AT1G80580Not availableUpstream-1442
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-1441
Matrix_209RAP2.6Not availableUpstream-1444
Matrix_234RAP2.3Not availableUpstream-1442
Matrix_261ATERF-1Not availableUpstream-1442
Matrix_285DDF1Not availableUpstream-1444
Matrix_288RAP2.3Not availableUpstream-1443
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-1443
Matrix_334AT3G23230Not availableUpstream-1441
Matrix_343AT2G33710Not availableUpstream-1442
Matrix_355ERF10;ERF11Not availableUpstream-1443
Matrix_363RAP2.3Not availableUpstream-1443
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-1442
Matrix_378ATERF1Not availableUpstream-1442
Matrix_406ATERF-7Not availableUpstream-1444
Matrix_45DRNNot availableUpstream-1442
Matrix_462ATERF-8Not availableUpstream-1444
Matrix_473RRTF1Not availableUpstream-1442
Matrix_493AT1G22985;AT1G71130Not availableUpstream-1442
Matrix_50ATERF14;AT5G43410Not availableUpstream-1443
Matrix_506DRNL;ATERF-4Not availableUpstream-1441
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-1441
Matrix_91CRF3Not availableUpstream-1442
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-954
Motif_136SEF4MOTIFGM7SSEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4)Upstream-328
Upstream-189
Motif_286SEBFCONSSTPR10ABinding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response elementUpstream-939
Upstream-933
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-939
Upstream-933
Motif_419MYB4 binding site motifNot availableUpstream-193
Motif_575TATABOX3TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A geneUpstream-1897
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-948
Upstream-946
Upstream-944
Motif_85SORLIP5ATone of Sequences Over-Represented in Light-Induced Promoters (SORLIPs) in Arabidopsis; Computationally identified phyA-induced motifs; Over-represented in both light-induced cotyledon-specific and root-specific genes; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-953
Motif_98SEF3MOTIFGMSEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4Upstream-331