View conserved binding sites


Gene
GM16G08440
Description
30S ribosomal protein S6
Alias
Glyma16g08440;Glyma16g08440.2;PAC:26351582;Glyma16g08440.2
Binding siteNameDescriptionLocationPosition
Matrix_146ORA47Not availableUpstream-432
Matrix_147ERF3;AT1G80580Not availableUpstream-434
Matrix_224ERF1Not availableUpstream-433
Matrix_234RAP2.3Not availableUpstream-432
Matrix_261ATERF-1Not availableUpstream-433
Matrix_272DEAR4Not availableUpstream-432
Matrix_287ERF2Not availableUpstream-432
Matrix_288RAP2.3Not availableUpstream-433
Matrix_295ERF1Not availableUpstream-434
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-433
Matrix_334AT3G23230Not availableUpstream-433
Matrix_355ERF10;ERF11Not availableUpstream-433
Matrix_360ORA59Not availableUpstream-434
Matrix_363RAP2.3Not availableUpstream-433
Matrix_378ATERF1Not availableUpstream-432
Matrix_406ATERF-7Not availableUpstream-434
Matrix_409DEAR3Not availableUpstream-433
Matrix_426CRF1;CRF2Not availableUpstream-433
Matrix_45DRNNot availableUpstream-434
Matrix_462ATERF-8Not availableUpstream-434
Matrix_484ATERF13Not availableUpstream-434
Matrix_493AT1G22985;AT1G71130Not availableUpstream-433
Matrix_50ATERF14;AT5G43410Not availableUpstream-433
Matrix_506DRNL;ATERF-4Not availableUpstream-433
Matrix_517ERF12Not availableUpstream-434
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-433
Matrix_91CRF3Not availableUpstream-433
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-434
Motif_98SEF3MOTIFGMSEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4Upstream-317