Matrix_101 | ERF5 | Not available | Upstream | -30 |
| | | Upstream | -126 |
Matrix_110 | ATABI4;AT3G57600 | Not available | Upstream | -32 |
| | | Upstream | -115 |
| | | Upstream | -116 |
| | | Upstream | -118 |
| | | Upstream | -119 |
| | | Upstream | -124 |
| | | Upstream | -125 |
Matrix_143 | GATA14;GATA6;GATA5 | Not available | Upstream | -101 |
| | | Upstream | -102 |
Matrix_146 | ORA47 | Not available | Upstream | -30 |
Matrix_154 | AT1G22190;AT1G36060;AT1G64380;RAP2.4;AT2G20880;AT2G22200;AT4G13620;AT4G28140;AT4G39780;AT5G65130 | Not available | Upstream | -28 |
| | | Upstream | -83 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -31 |
| | | Upstream | -32 |
Matrix_161 | MYBC1;AT3G10760;LUX;AT5G05090;AT5G59570 | Not available | Upstream | -99 |
| | | Upstream | -100 |
Matrix_166 | TGA4 | Not available | Upstream | -61 |
Matrix_171 | LBD3;LBD4 | Not available | Upstream | -119 |
Matrix_190 | ATERF1 | Not available | Upstream | -30 |
| | | Upstream | -118 |
| | | Upstream | -124 |
Matrix_195 | GATA2;GATA4 | Not available | Upstream | -100 |
| | | Upstream | -101 |
Matrix_206 | CUC1;ANAC100 | Not available | Upstream | -127 |
Matrix_210 | ARR1 | Not available | Upstream | -99 |
Matrix_224 | ERF1 | Not available | Upstream | -33 |
| | | Upstream | -77 |
| | | Upstream | -78 |
| | | Upstream | -119 |
| | | Upstream | -120 |
| | | Upstream | -122 |
| | | Upstream | -123 |
| | | Upstream | -125 |
| | | Upstream | -126 |
Matrix_234 | RAP2.3 | Not available | Upstream | -30 |
Matrix_244 | DREB2C | Not available | Upstream | -29 |
Matrix_246 | ARR10 | Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators | Upstream | -100 |
| | | Upstream | -101 |
Matrix_252 | RAP2.6 | Not available | Upstream | -78 |
| | | Upstream | -120 |
| | | Upstream | -123 |
| | | Upstream | -126 |
Matrix_257 | NAC050;ANAC051;anac057;NAC2 | Not available | Upstream | -127 |
Matrix_261 | ATERF-1 | Not available | Upstream | -30 |
| | | Upstream | -85 |
Matrix_268 | EMB2749;VND5;SMB;VND1;ANAC076;NAC101;ANAC105 | Not available | Upstream | -129 |
Matrix_283 | GATA15;GATA17;AT4G16141;GATA22;GATA23;GATA16;GNC | Not available | Upstream | -89 |
| | | Upstream | -90 |
Matrix_287 | ERF2 | Not available | Upstream | -30 |
Matrix_321 | HRD | Not available | Upstream | -30 |
Matrix_322 | NST3;ANAC015;BRN2 | Not available | Upstream | -128 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -29 |
| | | Upstream | -119 |
Matrix_333 | GATA3 | Not available | Upstream | -88 |
| | | Upstream | -89 |
Matrix_334 | AT3G23230 | Not available | Upstream | -31 |
Matrix_343 | AT2G33710 | Not available | Upstream | -30 |
| | | Upstream | -123 |
| | | Upstream | -126 |
| | | Upstream | -133 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -29 |
| | | Upstream | -119 |
Matrix_37 | GATA27 | Not available | Upstream | -89 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -34 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -30 |
| | | Upstream | -120 |
| | | Upstream | -123 |
Matrix_378 | ATERF1 | Not available | Upstream | -120 |
| | | Upstream | -123 |
Matrix_385 | DEAR4 | Not available | Upstream | -29 |
Matrix_387 | ORA47 | Not available | Upstream | -28 |
| | | Upstream | -83 |
Matrix_395 | AT1G19210;ORA47;AT4G31060;AT5G21960 | Not available | Upstream | -29 |
| | | Upstream | -84 |
Matrix_401 | MYB55 | Not available | Upstream | -126 |
Matrix_406 | ATERF-7 | Not available | Upstream | -83 |
| | | Upstream | -118 |
Matrix_409 | DEAR3 | Not available | Upstream | -29 |
| | | Upstream | -119 |
| | | Upstream | -122 |
| | | Upstream | -125 |
| | | Upstream | -132 |
Matrix_41 | anac058 | Not available | Upstream | -127 |
Matrix_425 | TIFY2A | Not available | Upstream | -91 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -31 |
| | | Upstream | -121 |
Matrix_454 | AT1G77200;ATERF38;AT4G16750;AT5G52020 | Not available | Upstream | -29 |
| | | Upstream | -122 |
Matrix_462 | ATERF-8 | Not available | Upstream | -83 |
| | | Upstream | -118 |
Matrix_47 | AtMYB77 | Not available | Upstream | -120 |
Matrix_473 | RRTF1 | Not available | Upstream | -123 |
Matrix_478 | AT1G01250 | Not available | Upstream | -30 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -30 |
| | | Upstream | -120 |
Matrix_5 | AT5G51190;ERF104 | Not available | Upstream | -130 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -119 |
| | | Upstream | -125 |
Matrix_505 | GATA8 | Not available | Upstream | -100 |
| | | Upstream | -101 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -31 |
| | | Upstream | -121 |
Matrix_515 | ddf2;ATCBF3;CBF1;CBF4 | Not available | Upstream | -28 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -33 |
| | | Upstream | -119 |
| | | Upstream | -120 |
| | | Upstream | -122 |
| | | Upstream | -123 |
| | | Upstream | -125 |
| | | Upstream | -126 |
Matrix_61 | ATCBF3 | Not available | Upstream | -29 |
Matrix_63 | ARR10 | Not available | Upstream | -100 |
| | | Upstream | -101 |
Matrix_70 | GATA26 | Not available | Upstream | -88 |
Matrix_73 | DEAR3;RAP2.9;RAP2.10 | Not available | Upstream | -30 |
Matrix_91 | CRF3 | Not available | Upstream | -30 |
| | | Upstream | -120 |
Matrix_92 | AT1G33760 | Not available | Upstream | -29 |
Motif_182 | MYB2CONSENSUSAT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22 | Upstream | -110 |
Motif_221 | MYBCORE | Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis | Upstream | -110 |
Motif_305 | SP1SV40 | SP-1 binding site (GC box) in enhancer regions of SV40 and human metallothionein IIA (hMT IIA) | Upstream | -46 |
| | | Upstream | -133 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -34 |
Motif_336 | MYBMOUSE | Binding site for mouse c-myb protein | Upstream | -110 |
Motif_353 | HEXAMERATH4 | hexamer motif of Arabidopsis thaliana histone H4 promoter;Identification of cis-elements regulating the expression of an Arabidopsis histone H4 gene | Upstream | -65 |
Motif_371 | DRE-like promoter motif | The Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses | Upstream | -30 |
Motif_392 | PALBOXAPC | Box A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box L | Upstream | -85 |
Motif_411 | PRECONSCRHSP70A | Consensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and light | Upstream | -12 |
| | | Upstream | -74 |
Motif_454 | DRECRTCOREAT | Core motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower) | Upstream | -31 |
Motif_591 | CBFHV | Binding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs) | Upstream | -31 |
Motif_630 | WBOXNTCHN48 | W box identified in the region between -125 and -69 of a tobacco class I basic chitinase gene CHN48; NtWRKY1, NtWRKY2 and NtWRKY4 bound to W box; NtWRKYs possibly involved in elicitor-respsonsive transcription of defense genes in tobacco | Upstream | -106 |