View conserved binding sites
- Gene
- GM16G04590
- Description
- YTH domain family protein
- Alias
- Glyma16g04590;Glyma16g04590.1;PAC:26351222;Glyma16g04590.1
Binding site | Name | Description | Location | Position |
---|---|---|---|---|
Matrix_101 | ERF5 | Not available | Upstream | -33 |
Matrix_119 | RRTF1 | Not available | Upstream | -34 |
Matrix_138 | RRTF1 | Not available | Upstream | -34 |
Matrix_224 | ERF1 | Not available | Upstream | -34 |
Matrix_234 | RAP2.3 | Not available | Upstream | -33 |
Matrix_252 | RAP2.6 | Not available | Upstream | -33 |
Matrix_261 | ATERF-1 | Not available | Upstream | -33 |
Matrix_287 | ERF2 | Not available | Upstream | -33 |
Matrix_288 | RAP2.3 | Not available | Upstream | -34 |
Matrix_295 | ERF1 | Not available | Upstream | -33 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -34 |
Matrix_334 | AT3G23230 | Not available | Upstream | -32 |
Matrix_343 | AT2G33710 | Not available | Upstream | -33 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -34 |
Matrix_360 | ORA59 | Not available | Upstream | -33 |
Matrix_363 | RAP2.3 | Not available | Upstream | -34 |
Matrix_378 | ATERF1 | Not available | Upstream | -33 |
Matrix_406 | ATERF-7 | Not available | Upstream | -35 |
Matrix_414 | AGL15 | Not available | Upstream | -77 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -32 |
Matrix_473 | RRTF1 | Not available | Upstream | -33 |
Matrix_48 | PI | Not available | Upstream | -25 |
Matrix_484 | ATERF13 | Not available | Upstream | -33 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -34 |
Matrix_501 | DAG2 | Not available | Upstream | -1667 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -32 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -32 |
Motif_69 | CTRMCAMV35S | CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA | Upstream | -19 |