View conserved binding sites


Gene
GM16G04590
Description
YTH domain family protein
Alias
Glyma16g04590;Glyma16g04590.1;PAC:26351222;Glyma16g04590.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-33
Matrix_119RRTF1Not availableUpstream-34
Matrix_138RRTF1Not availableUpstream-34
Matrix_224ERF1Not availableUpstream-34
Matrix_234RAP2.3Not availableUpstream-33
Matrix_252RAP2.6Not availableUpstream-33
Matrix_261ATERF-1Not availableUpstream-33
Matrix_287ERF2Not availableUpstream-33
Matrix_288RAP2.3Not availableUpstream-34
Matrix_295ERF1Not availableUpstream-33
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-34
Matrix_334AT3G23230Not availableUpstream-32
Matrix_343AT2G33710Not availableUpstream-33
Matrix_355ERF10;ERF11Not availableUpstream-34
Matrix_360ORA59Not availableUpstream-33
Matrix_363RAP2.3Not availableUpstream-34
Matrix_378ATERF1Not availableUpstream-33
Matrix_406ATERF-7Not availableUpstream-35
Matrix_414AGL15Not availableUpstream-77
Matrix_426CRF1;CRF2Not availableUpstream-32
Matrix_473RRTF1Not availableUpstream-33
Matrix_48PINot availableUpstream-25
Matrix_484ATERF13Not availableUpstream-33
Matrix_50ATERF14;AT5G43410Not availableUpstream-34
Matrix_501DAG2Not availableUpstream-1667
Matrix_506DRNL;ATERF-4Not availableUpstream-32
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-32
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-19