Matrix_119 | RRTF1 | Not available | Upstream | -466 |
Matrix_138 | RRTF1 | Not available | Upstream | -466 |
Matrix_146 | ORA47 | Not available | Upstream | -465 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -465 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -464 |
Matrix_183 | BES1 | A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana | Upstream | -533 |
Matrix_186 | FHY3 | Not available | Upstream | -534 |
Matrix_224 | ERF1 | Not available | Upstream | -466 |
Matrix_243 | RAP2.12;RAP2.2 | Not available | Upstream | -464 |
Matrix_261 | ATERF-1 | Not available | Upstream | -465 |
Matrix_287 | ERF2 | Not available | Upstream | -465 |
Matrix_288 | RAP2.3 | Not available | Upstream | -466 |
Matrix_295 | ERF1 | Not available | Upstream | -465 |
Matrix_321 | HRD | Not available | Upstream | -465 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -466 |
Matrix_334 | AT3G23230 | Not available | Upstream | -464 |
Matrix_343 | AT2G33710 | Not available | Upstream | -465 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -466 |
Matrix_360 | ORA59 | Not available | Upstream | -465 |
Matrix_363 | RAP2.3 | Not available | Upstream | -466 |
Matrix_374 | AT5G07580;AT5G61590 | Not available | Upstream | -465 |
Matrix_377 | AT1G75490;DREB2C;AT2G40350;AT5G18450 | Not available | Upstream | -465 |
Matrix_385 | DEAR4 | Not available | Upstream | -466 |
Matrix_406 | ATERF-7 | Not available | Upstream | -467 |
Matrix_409 | DEAR3 | Not available | Upstream | -466 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -464 |
Matrix_45 | DRN | Not available | Upstream | -465 |
Matrix_454 | AT1G77200;ATERF38;AT4G16750;AT5G52020 | Not available | Upstream | -466 |
Matrix_462 | ATERF-8 | Not available | Upstream | -467 |
Matrix_476 | bHLH115;bHLH34 | Not available | Upstream | -531 |
Matrix_484 | ATERF13 | Not available | Upstream | -465 |
Matrix_493 | AT1G22985;AT1G71130 | Not available | Upstream | -465 |
Matrix_50 | ATERF14;AT5G43410 | Not available | Upstream | -466 |
Matrix_506 | DRNL;ATERF-4 | Not available | Upstream | -464 |
Matrix_517 | ERF12 | Not available | Upstream | -465 |
Matrix_57 | WIN1;SHN3;SHN2 | Not available | Upstream | -466 |
Matrix_77 | PRR5 | Not available | Upstream | -534 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -464 |
Matrix_91 | CRF3 | Not available | Upstream | -465 |
Motif_192 | BOXLCOREDCPAL | Consensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitro | Upstream | -106 |
Motif_194 | EBOXBNNAPA | E-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1 | Upstream | -471 |
Motif_254 | MYB46;MYB83 | MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes | Upstream | -106 |
Motif_292 | MYBPZM | Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes | Upstream | -105 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -464 |
Motif_382 | CATATGGMSAUR | Sequence found in NDE element in soybean SAUR (Small Auxin-Up RNA) 15A gene promoter; Involved in auxin responsiveness | Upstream | -471 |
Motif_391 | REALPHALGLHCB21 | REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulation | Upstream | -107 |
Motif_392 | PALBOXAPC | Box A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box L | Upstream | -728 |
Motif_419 | MYB4 binding site motif | Not available | Upstream | -106 |
Motif_426 | MYB58;MYB63 | MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis | Upstream | -106 |
Motif_618 | MYB1AT | MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis | Upstream | -108 |
Motif_666 | MYB binding site promoter | A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes | Upstream | -107 |