View conserved binding sites


Gene
GM15G01410
Description
Putative esterase/lipase 2
Alias
Glyma15g01410;Glyma15g01410.1;PAC:26330226;Glyma15g01410.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-229
Upstream-248
Upstream-249
Upstream-250
Upstream-251
Matrix_110ATABI4;AT3G57600Not availableUpstream-229
Matrix_119RRTF1Not availableUpstream-206
Matrix_138RRTF1Not availableUpstream-206
Matrix_146ORA47Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Matrix_147ERF3;AT1G80580Not availableUpstream-206
Upstream-207
Upstream-231
Upstream-250
Upstream-251
Matrix_151ASIL1Not availableUpstream-233
Upstream-249
Upstream-250
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-207
Upstream-208
Upstream-229
Upstream-249
Upstream-250
Upstream-251
Upstream-252
Matrix_187CDC5Not availableUpstream-297
Matrix_190ATERF1Not availableUpstream-206
Upstream-207
Upstream-208
Upstream-228
Upstream-248
Upstream-249
Matrix_206CUC1;ANAC100Not availableUpstream-259
Matrix_224ERF1Not availableUpstream-206
Upstream-208
Upstream-209
Upstream-230
Matrix_229CDC5A cdc5+ homolog of a higher plant, Arabidopsis thalianaUpstream-297
Matrix_234RAP2.3Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-229
Upstream-231
Matrix_243RAP2.12;RAP2.2Not availableUpstream-207
Upstream-208
Matrix_252RAP2.6Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-229
Upstream-231
Matrix_261ATERF-1Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Matrix_269FHY3/FAR1Not availableUpstream-93
Matrix_272DEAR4Not availableUpstream-206
Upstream-207
Upstream-208
Matrix_287ERF2Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-229
Matrix_288RAP2.3Not availableUpstream-206
Upstream-208
Upstream-209
Matrix_295ERF1Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Matrix_321HRDNot availableUpstream-206
Upstream-207
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-206
Upstream-208
Upstream-209
Upstream-230
Matrix_334AT3G23230Not availableUpstream-207
Upstream-208
Upstream-210
Upstream-211
Upstream-230
Upstream-232
Matrix_343AT2G33710Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-248
Upstream-249
Matrix_344ATERF15;AT4G18450Not availableUpstream-206
Upstream-207
Upstream-250
Upstream-251
Matrix_349CDC5Not availableUpstream-297
Matrix_355ERF10;ERF11Not availableUpstream-206
Upstream-208
Upstream-209
Upstream-249
Upstream-250
Matrix_360ORA59Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Matrix_363RAP2.3Not availableUpstream-206
Upstream-208
Upstream-209
Matrix_374AT5G07580;AT5G61590Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-230
Upstream-231
Upstream-250
Upstream-251
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-206
Upstream-207
Matrix_378ATERF1Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Matrix_381ATHB9Not availableUpstream-250
Matrix_396AP3Not availableUpstream-169
Upstream-170
Matrix_405DREB2CNot availableUpstream-207
Upstream-208
Matrix_406ATERF-7Not availableUpstream-205
Upstream-207
Upstream-208
Upstream-250
Upstream-251
Matrix_409DEAR3Not availableUpstream-206
Upstream-208
Upstream-209
Matrix_41anac058Not availableUpstream-259
Matrix_420ANAC58Not availableUpstream-260
Matrix_426CRF1;CRF2Not availableUpstream-207
Upstream-208
Upstream-210
Upstream-211
Upstream-230
Upstream-232
Matrix_433ATERF1Not availableUpstream-249
Upstream-250
Matrix_448ATERF6Not availableUpstream-33
Upstream-206
Upstream-233
Upstream-249
Upstream-250
Matrix_45DRNNot availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-231
Upstream-250
Upstream-251
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-206
Matrix_459ATHB9;CNA;PHB;ATHB-8;REVNot availableUpstream-250
Matrix_462ATERF-8Not availableUpstream-205
Upstream-207
Upstream-208
Upstream-250
Upstream-251
Matrix_473RRTF1Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-229
Upstream-231
Upstream-232
Matrix_484ATERF13Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-250
Upstream-251
Matrix_493AT1G22985;AT1G71130Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Upstream-228
Matrix_5AT5G51190;ERF104Not availableUpstream-206
Upstream-207
Upstream-250
Upstream-251
Matrix_50ATERF14;AT5G43410Not availableUpstream-206
Upstream-208
Upstream-209
Upstream-230
Upstream-249
Upstream-250
Matrix_506DRNL;ATERF-4Not availableUpstream-207
Upstream-208
Upstream-230
Upstream-232
Matrix_517ERF12Not availableUpstream-206
Upstream-207
Upstream-231
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-206
Upstream-208
Upstream-209
Upstream-230
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-207
Upstream-208
Upstream-210
Upstream-211
Matrix_91CRF3Not availableUpstream-206
Upstream-207
Upstream-209
Upstream-210
Motif_136SEF4MOTIFGM7SSEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4)Downstream4554
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-255
Motif_153MARABOX1A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR)Upstream-767
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-167
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-207
Upstream-210
Motif_320AGCBOXNPGLBAGC box repeated twice in a 61 bp enhancer element in tobacco class I beta-1,3-glucanase (GLB) gene;GCC-box; Binding sequence of Arabidopsis AtERFs; AtERF1,2 and 5 functioned as activators of GCC box-dependent transcription; AtERF3 and 4 acted as repressors; AtERF proteins are stress signal-response factors; EREBP2 binding site; Conserved in most PR-protein genes; Rice MAPK (BWMK1) phosphorylates OS EREBP1, which enhance DNA-binding activity of the factor to the GCC boxUpstream-210
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-290
Motif_358UP2ATMSDUp2 motif found in 193 of the 1184 up-regulated genes after main stem decapitation in ArabidopsisUpstream-170
Motif_392PALBOXAPCBox A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box LUpstream-69
Upstream-1799
Motif_411PRECONSCRHSP70AConsensus sequence of PRE (plastid response element) in the promoters of HSP70A in Chlamydomonas; Involved in induction of HSP70A gene by both MgProto and lightUpstream-101
Motif_450E2FCONSENSUSE2F consensus sequence of all different E2F-DP-binding motifs that were experimentally verified in plantsUpstream-225
Upstream-1498
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-264
Motif_495TRANSINITMONOCOTSContext sequence of translational initiation codon in monocotsUpstream-1104
Motif_544CACGCAATGMGH3Sequence found in D4 element in Soybean GH3 gene promoter; Showed constitutive activity with TGTCTC element; Confers auxin inducibility; Binding site of nuclear proteinUpstream-260
Motif_549TBF1The HSF-like transcription factor TBF1 is a major molecular switch for plant growth-to-defense transitionUpstream-93
Motif_603SITEIIATCYTCSite II element found in the promoter regions of cytochrome genes (Cytc-1, Cytc-2) in Arabidopsis; Located between -147 and -156 from the translational starts sites;Overrepresented in the promoters of nuclear genes encoding components of the oxidative phosphorylation (OxPhos) machinery from both Arabidopsis and riceUpstream-220
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionDownstream4653
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-330
Upstream-332