View conserved binding sites


Gene
GM13G43560
Description
Kinesin-like protein KIF2A
Alias
Glyma13g43560;Glyma13g43560.1;PAC:26314789;Glyma13g43560.1
Binding siteNameDescriptionLocationPosition
Matrix_102WRKY21Not availableUpstream-139
Matrix_104PINot availableUpstream-267
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-131
Upstream-267
Matrix_109GBF3Not availableUpstream-267
Upstream-269
Matrix_110ATABI4;AT3G57600Not availableUpstream-330
Matrix_113ABI5Not availableUpstream-267
Upstream-269
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-128
Upstream-198
Upstream-199
Upstream-264
Upstream-265
Matrix_120BEE2Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_122ABF1;AREB2Not availableUpstream-267
Upstream-268
Matrix_129ABF1Not availableUpstream-268
Matrix_134ABF1Not availableUpstream-268
Upstream-269
Matrix_14ZCW32;AT5G62610Not availableUpstream-131
Upstream-132
Upstream-133
Upstream-268
Upstream-269
Matrix_145GBF4;AT5G44080Not availableUpstream-269
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorUpstream-264
Matrix_153AP2Not availableUpstream-131
Matrix_156POC1Not availableUpstream-267
Upstream-269
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_17WRKY22Not availableUpstream-139
Matrix_190ATERF1Not availableUpstream-212
Matrix_192FHY3/FAR1Not availableUpstream-265
Upstream-269
Matrix_194HYH;HY5Not availableUpstream-265
Matrix_196TCP20;AT5G41030Not availableUpstream-208
Upstream-209
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_202WRKY71;WRKY28;WRKY8Not availableUpstream-140
Matrix_207WRKY10;WRKY57;AT2G44745;ATWRKY13;WRKY49Not availableUpstream-139
Matrix_214AP1Not availableUpstream-266
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-265
Upstream-269
Matrix_233MYC3Not availableUpstream-132
Upstream-133
Upstream-269
Matrix_24POC1Not availableUpstream-264
Matrix_247PIF3Not availableUpstream-202
Upstream-268
Matrix_256IXR11;KNAT5;KNAT4;KNAT3Not availableUpstream-212
Matrix_264ATAREB1Not availableUpstream-129
Upstream-265
Upstream-268
Matrix_27ATAIB;ATNIG1Not availableUpstream-132
Upstream-133
Matrix_296GBF2Not availableUpstream-268
Upstream-269
Matrix_3WRKY48Not availableUpstream-139
Matrix_300bZIP68;bZIP16Not availableUpstream-268
Upstream-269
Matrix_301PIL5Not availableUpstream-127
Upstream-269
Matrix_320MYC4Not availableUpstream-132
Upstream-133
Matrix_323BIM3Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_330MYC2;TT8Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_331GBF1Not availableUpstream-267
Upstream-269
Matrix_332SPT;ALCNot availableUpstream-131
Upstream-132
Upstream-133
Upstream-268
Upstream-269
Matrix_338AP2Not availableUpstream-129
Upstream-265
Matrix_339bHLH104Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_345POC1Not availableUpstream-128
Upstream-198
Upstream-199
Upstream-264
Upstream-265
Matrix_356PRR5Not availableUpstream-125
Upstream-129
Upstream-261
Upstream-265
Matrix_365AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1Not availableUpstream-132
Upstream-133
Matrix_369AT2G18300Not availableUpstream-130
Upstream-131
Upstream-132
Upstream-266
Matrix_370WRKY50;WRKY51Not availableUpstream-139
Matrix_384ATWRKY17Not availableUpstream-139
Matrix_389ILR3Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_395AT1G19210;ORA47;AT4G31060;AT5G21960Not availableUpstream-213
Matrix_403BZR1Not availableUpstream-266
Matrix_418KNAT6;KNAT2Not availableUpstream-212
Matrix_437MYC2Not availableUpstream-132
Upstream-133
Matrix_438AtbZIP63Not availableUpstream-266
Matrix_443AGL15Not availableUpstream-266
Matrix_449BIM2Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_465MYC4Not availableUpstream-131
Upstream-132
Upstream-268
Matrix_476bHLH115;bHLH34Not availableUpstream-132
Matrix_480BES1Not availableUpstream-131
Upstream-132
Matrix_488ABF1Not availableUpstream-119
Upstream-157
Upstream-260
Upstream-267
Upstream-328
Matrix_53MYC3Not availableUpstream-130
Upstream-133
Upstream-134
Upstream-266
Matrix_55PIF3Not availableUpstream-267
Matrix_60AT1G01260;AT5G57150Not availableUpstream-269
Matrix_64PIF5Not availableUpstream-269
Matrix_7PIF4Not availableUpstream-131
Upstream-132
Upstream-268
Upstream-270
Matrix_75WRKY29Not availableUpstream-139
Matrix_77PRR5Not availableUpstream-130
Upstream-266
Upstream-267
Matrix_80BIM1Not availableUpstream-131
Upstream-132
Upstream-133
Upstream-267
Upstream-269
Matrix_90BEE1;BEE3;AT3G07340;AT5G48560;AT5G50915Not availableUpstream-132
Upstream-133
Matrix_91CRF3Not availableUpstream-327
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-132
Upstream-134
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-133
Upstream-269
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-133
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-267
Upstream-268
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-132
Upstream-133
Upstream-268
Upstream-269
Upstream-399
Motif_244ABRE-like binding site motifNot availableUpstream-267
Upstream-269
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-267
Upstream-269
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-331
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-133
Motif_375ERELEE4ERE (ethylene responsive element) of tomato E4 and carnation GST1 genes; GST1 is related to senescence; Found in the 5'-LTR region of TLC1.1 retrotransposon family in Lycopersicon chilense; ERE motifs mediate ethylene-induced activation of the U3 promoter regionUpstream-101
Upstream-453
Motif_392PALBOXAPCBox A; Consensus; One of three putative cis-acting elements (boxes P, A, and L) of phenylalanine ammonia-lyase (PAL; EC 4.3.1.5) genes in parsley (P.c.); None of these elements (boxes P, A, and L) alone, or the promoter region containing all of them together, conferred elicitor or light responsiveness. These elements appear to be necessary but not sufficient for elicitor- or light-mediated PAL gene activation; See also Box P, Box LUpstream-214
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-268
Upstream-269
Motif_473ABREOSRGA1ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxiaUpstream-268
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-135
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-267
Upstream-270
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-267
Upstream-270
Motif_638ABRE binding site motifNot availableUpstream-267
Upstream-269
Motif_641LRENPCABELRE; A positive light regulatory element in tobacco CAB (cab-E) gene; Located at -241Upstream-266
Upstream-270