View conserved binding sites


Gene
GM13G23150
Description
Monogalactosyldiacylglycerol synthase 2, chloroplastic
Alias
Glyma13g23150;Glyma13g23150.1;PAC:26318570;Glyma13g23150.1
Binding siteNameDescriptionLocationPosition
Matrix_142ZFP8Not availableUpstream-42
Matrix_148WRKY60Not availableUpstream-63
Matrix_151ASIL1Not availableUpstream-67
Matrix_178HSFB2ANot availableUpstream-258
Upstream-259
Matrix_197NAPNot availableUpstream-31
Matrix_220WRKY18Not availableUpstream-30
Matrix_23ANAC46Not availableUpstream-44
Matrix_235WRKY67;WRKY64;WRKY63;WRKY66Not availableUpstream-31
Upstream-32
Matrix_280TCP24;TCP1;BRC2;ATTCP18Not availableUpstream-41
Matrix_370WRKY50;WRKY51Not availableUpstream-64
Matrix_401MYB55Not availableUpstream-59
Matrix_429KAN4Not availableUpstream-258
Matrix_452MYB46Not availableUpstream-59
Upstream-84
Matrix_470WRKY18Not availableUpstream-30
Upstream-64
Matrix_490AtMYB77;ATMYB44Not availableUpstream-233
Matrix_504WRKY40Not availableUpstream-31
Matrix_74LFYNot availableIntron427
Matrix_95LFYNot availableUpstream-64
Upstream-65
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-145
Motif_131P1BSPHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtiiUpstream-240
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-235
Motif_207MAMMALENHANCore sequence in enhancers from polyoma virus and from the IgM heavy chain geneUpstream-61
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-235
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-22
Upstream-163
Upstream-372
Upstream-447
Motif_258-10PEHVPSBD-10 promoter element found in the barley (H.v.) chloroplast psbD gene promoter; Involved in the expression of the plastid gene psbD which encodes a photosystem II reaction center chlorophyll-binding protein that is activated by blue, white or UV-A lightUpstream-243
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisUpstream-32
Upstream-66
Motif_332SV40COREENHANSV40 core enhancer; Similar sequences found in rbcS genesUpstream-61
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-235
Motif_348WBBOXPCWRKY1WB box; WRKY proteins bind specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box; Found in amylase gene in sweet potato, alpha-Amy2 genes in wheat, barley, and wild oat, PR1 gene in parsley, and a transcription factor gene in ArabidopsisUpstream-65
Motif_504LFYStructural basis for LEAFY floral switch function and similarity with helix-turn-helix proteinsUpstream-262
Motif_618MYB1ATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in ArabidopsisUpstream-62
Motif_628TATCCAOSAMYTATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2Upstream-239
Motif_631MARARSARS element; Motif found in SAR (MAR)Upstream-903