View conserved binding sites


Gene
GM12G36716
Description
A20 and AN1 domain-containing stress-associated protein
Alias
Glyma12g36716;Glyma12g36716.1;PAC:26293631;Glyma12g36716.1
Binding siteNameDescriptionLocationPosition
Matrix_113ABI5Not availableDownstream1355
Downstream1357
Matrix_129ABF1Not availableDownstream1356
Matrix_130TCP16Not availableDownstream1181
Matrix_144AT5G08330;AT5G23280Not availableDownstream1181
Matrix_183BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaDownstream576
Matrix_192FHY3/FAR1Not availableDownstream1353
Matrix_196TCP20;AT5G41030Not availableDownstream1179
Matrix_216TCP16Not availableDownstream1181
Matrix_232TCP23Not availableDownstream1182
Matrix_25AP3Not availableUpstream-105
Matrix_257NAC050;ANAC051;anac057;NAC2Not availableUpstream-312
Matrix_264ATAREB1Not availableDownstream1353
Downstream1356
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsDownstream1181
Matrix_294MEE35Not availableDownstream1181
Matrix_297TCP15Not availableDownstream1180
Matrix_301PIL5Not availableDownstream1351
Matrix_338AP2Not availableDownstream1353
Matrix_348AT5G51910Not availableDownstream1181
Matrix_356PRR5Not availableDownstream1353
Matrix_39AP1Not availableUpstream-189
Matrix_40TCP2Not availableDownstream1181
Matrix_403BZR1Not availableDownstream1354
Matrix_42AT2G45680Not availableDownstream1181
Matrix_443AGL15Not availableDownstream1354
Matrix_48PINot availableUpstream-35
Matrix_507TCP3Not availableDownstream1180
Matrix_82TCP17Not availableDownstream1181
Motif_188CDA1ATCAB2CDA-1 (CAB2 DET1-associated factor 1) binding site in DtRE (dark response element) f of chlorophyll a/b-binding protein2 (CAB2) gene in ArabidopsisUpstream-19
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-127
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-127
Motif_258-10PEHVPSBD-10 promoter element found in the barley (H.v.) chloroplast psbD gene promoter; Involved in the expression of the plastid gene psbD which encodes a photosystem II reaction center chlorophyll-binding protein that is activated by blue, white or UV-A lightUpstream-62
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-126
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-168
Motif_419MYB4 binding site motifNot availableUpstream-127
Motif_426MYB58;MYB63MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in ArabidopsisUpstream-127
Motif_453HEXMOTIFTAH3H4hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding siteUpstream-330
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-128
Motif_576TGACGTVMAMYTGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seedsUpstream-330
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-130
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-74
Upstream-72
Upstream-70
Upstream-31
Upstream-29