View conserved binding sites


Gene
GM12G16533
Description
No description available
Alias
Glyma12g16533;Glyma12g16533.1;PAC:26292349;Glyma12g16533.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-1641
Matrix_120BEE2Not availableUpstream-287
Upstream-288
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-287
Upstream-288
Matrix_186FHY3Not availableUpstream-291
Matrix_196TCP20;AT5G41030Not availableUpstream-377
Upstream-383
Matrix_224ERF1Not availableUpstream-1640
Matrix_261ATERF-1Not availableUpstream-1641
Matrix_277RAP2.6Not availableUpstream-1640
Matrix_295ERF1Not availableUpstream-1641
Matrix_323BIM3Not availableUpstream-287
Upstream-288
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-1640
Matrix_330MYC2;TT8Not availableUpstream-287
Upstream-288
Matrix_333GATA3Not availableUpstream-12
Matrix_334AT3G23230Not availableUpstream-1642
Matrix_335HSFB2ANot availableUpstream-21
Matrix_339bHLH104Not availableUpstream-287
Upstream-288
Matrix_343AT2G33710Not availableUpstream-1641
Matrix_363RAP2.3Not availableUpstream-1640
Matrix_369AT2G18300Not availableUpstream-285
Upstream-286
Upstream-287
Upstream-288
Matrix_378ATERF1Not availableUpstream-1641
Matrix_389ILR3Not availableUpstream-287
Upstream-288
Matrix_426CRF1;CRF2Not availableUpstream-1642
Matrix_449BIM2Not availableUpstream-287
Upstream-288
Matrix_45DRNNot availableUpstream-1641
Matrix_465MYC4Not availableUpstream-287
Upstream-288
Matrix_48PINot availableUpstream-260
Matrix_484ATERF13Not availableUpstream-1641
Matrix_488ABF1Not availableUpstream-280
Matrix_506DRNL;ATERF-4Not availableUpstream-1642
Matrix_90BEE1;BEE3;AT3G07340;AT5G48560;AT5G50915Not availableUpstream-288
Upstream-289
Matrix_91CRF3Not availableUpstream-1641
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-243
Upstream-288
Motif_256RHE_elementFunctional Conservation of a Root Hair Cell-Specific cis-Element in Angiosperms with Different Root Hair Distribution PatternsUpstream-284
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-1641
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-242
Upstream-280
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-61
Upstream-148
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-282
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-1103
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-195