View conserved binding sites


Gene
GM12G16503
Description
No description available
Alias
Glyma12g16503;Glyma12g16503.1;PAC:26294074;Glyma12g16503.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-321
Upstream-324
Matrix_110ATABI4;AT3G57600Not availableUpstream-319
Upstream-320
Matrix_119RRTF1Not availableUpstream-320
Matrix_138RRTF1Not availableUpstream-320
Matrix_146ORA47Not availableUpstream-321
Matrix_147ERF3;AT1G80580Not availableUpstream-321
Upstream-322
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-322
Upstream-325
Matrix_171LBD3;LBD4Not availableUpstream-320
Matrix_190ATERF1Not availableUpstream-321
Upstream-322
Matrix_224ERF1Not availableUpstream-320
Upstream-321
Upstream-323
Upstream-324
Matrix_234RAP2.3Not availableUpstream-321
Upstream-322
Upstream-324
Matrix_243RAP2.12;RAP2.2Not availableUpstream-322
Upstream-323
Matrix_252RAP2.6Not availableUpstream-321
Upstream-324
Matrix_261ATERF-1Not availableUpstream-321
Upstream-322
Matrix_272DEAR4Not availableUpstream-321
Upstream-322
Upstream-324
Upstream-325
Matrix_280TCP24;TCP1;BRC2;ATTCP18Not availableUpstream-325
Matrix_287ERF2Not availableUpstream-321
Upstream-322
Upstream-324
Upstream-325
Matrix_288RAP2.3Not availableUpstream-320
Upstream-323
Matrix_295ERF1Not availableUpstream-321
Upstream-322
Upstream-324
Upstream-325
Matrix_321HRDNot availableUpstream-285
Upstream-321
Upstream-322
Upstream-324
Upstream-325
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-320
Upstream-321
Upstream-323
Upstream-324
Matrix_334AT3G23230Not availableUpstream-322
Upstream-323
Upstream-325
Upstream-326
Matrix_343AT2G33710Not availableUpstream-321
Upstream-322
Upstream-324
Upstream-325
Matrix_355ERF10;ERF11Not availableUpstream-320
Upstream-321
Upstream-323
Upstream-324
Matrix_360ORA59Not availableUpstream-321
Upstream-324
Matrix_363RAP2.3Not availableUpstream-320
Upstream-321
Upstream-323
Upstream-324
Matrix_374AT5G07580;AT5G61590Not availableUpstream-324
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-321
Matrix_378ATERF1Not availableUpstream-321
Upstream-324
Matrix_405DREB2CNot availableUpstream-322
Matrix_406ATERF-7Not availableUpstream-319
Upstream-320
Upstream-322
Upstream-323
Matrix_409DEAR3Not availableUpstream-320
Upstream-323
Matrix_426CRF1;CRF2Not availableUpstream-322
Upstream-323
Upstream-325
Upstream-326
Matrix_448ATERF6Not availableUpstream-323
Matrix_45DRNNot availableUpstream-321
Upstream-322
Matrix_462ATERF-8Not availableUpstream-319
Upstream-320
Upstream-322
Upstream-323
Matrix_473RRTF1Not availableUpstream-321
Upstream-322
Upstream-324
Matrix_48PINot availableUpstream-331
Matrix_484ATERF13Not availableUpstream-321
Upstream-322
Upstream-324
Upstream-325
Matrix_493AT1G22985;AT1G71130Not availableUpstream-321
Upstream-322
Upstream-324
Upstream-325
Matrix_5AT5G51190;ERF104Not availableUpstream-324
Matrix_50ATERF14;AT5G43410Not availableUpstream-320
Upstream-323
Matrix_506DRNL;ATERF-4Not availableUpstream-322
Upstream-323
Matrix_517ERF12Not availableUpstream-321
Matrix_53MYC3Not availableUpstream-326
Upstream-327
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-320
Upstream-321
Upstream-323
Upstream-324
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-322
Upstream-323
Upstream-325
Upstream-326
Matrix_91CRF3Not availableUpstream-321
Upstream-322
Upstream-324
Upstream-325
Motif_104CAREOSREP1CAREs (CAACTC regulatory elements) found in the promoter region of a cystein proteinase (REP-1) gene in riceUpstream-311
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-329
Motif_195TATABOX4TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A gene; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiationDownstream14484
Motif_223LTRE1HVBLT49LTRE-1 (low-temperature-responsive element) in barley (H.v.) blt4.9 gene promoter; A new LTRE; A previously known LTRE is CCGACUpstream-130
Motif_26GRF7Arabidopsis GROWTH-REGULATING FACTOR7 Functions as a Transcriptional Repressor of Abscisic Acid- and Osmotic Stress-Responsive Genes, Including DREB2AUpstream-583
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-322
Upstream-325
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-286
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-286
Motif_533Bellringer/replumless/pennywise BS3 IN AGRepression of AGAMOUS by BELLRINGER in Floral and Inflorescence MeristemsUpstream-857
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-286
Motif_653INTRONLOWER3' intron-exon splice junctions; Plant intron lower sequence; Consensus sequence for plant intronsUpstream-306
Motif_673Bellringer/replumless/pennywise BS2 IN AGRepression of AGAMOUS by BELLRINGER in Floral and Inflorescence MeristemsUpstream-857