PLAZA 3.0 Dicots DNA motifs

View conserved binding sites

Gene: GM10G44150
Description: Callose synthase
Alias: Glyma10g44150;Glyma10g44150.1;PAC:26344657;Glyma10g44150.1

Binding site	Name	Description	Location	Position
Matrix_101	ERF5	Not available	Intron	2145
Matrix_127	AtMYB15	More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thaliana	Intron	37540
Matrix_131	HDG12;EDT1;GL2;HDG8	Not available	Intron	1850
Matrix_153	AP2	Not available	Intron	19050
Matrix_155	RAP2.6;ERF110;ABR1	Not available	Intron	27682
Matrix_160	RVE1	Not available	Intron	7012
Matrix_174	ZAT2	Not available	Intron	3062
			Intron	6900
			Intron	13773
			Intron	17791
Matrix_181	Dof5.7	Not available	Intron	32342
			Intron	33135
Matrix_21	HSFC1	Not available	Intron	19451
Matrix_34	RAV1_2	RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants	Intron	4479
			Intron	33058
Matrix_375	AtSPL8	Not available	Intron	41519
Matrix_396	AP3	Not available	Upstream	-826
Matrix_401	MYB55	Not available	Upstream	-1016
Matrix_409	DEAR3	Not available	Intron	2144
Matrix_412	GL1	Not available	Intron	6268
			Intron	6936
			Intron	24033
			Intron	24743
			Intron	34336
Matrix_414	AGL15	Not available	Upstream	-967
Matrix_448	ATERF6	Not available	Intron	27680
Matrix_467	RAV1	Not available	Intron	4479
			Intron	33058
Matrix_477	RAV1	Not available	Intron	4479
			Intron	33058
Matrix_493	AT1G22985;AT1G71130	Not available	Intron	2145
Matrix_6	AT1G70000	Not available	Intron	10317
Matrix_93	YAB5	Not available	Intron	25334
Motif_129	GAGAGMGSA1	GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNA	Intron	15729
			Intron	15731
			Intron	15733
Motif_192	BOXLCOREDCPAL	Consensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitro	Upstream	-1013
Motif_212	GARE2OSREP1	Gibberellin-responsive element (GARE) found in the promoter region of a cystein proteinase (REP-1) gene in rice	Upstream	-363
Motif_254	MYB46;MYB83	MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes	Upstream	-1013
Motif_292	MYBPZM	Core of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes	Upstream	-1016
			Upstream	-1012
Motif_391	REALPHALGLHCB21	REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulation	Upstream	-1014
Motif_419	MYB4 binding site motif	Not available	Upstream	-1013
Motif_426	MYB58;MYB63	MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis	Upstream	-1013
Motif_441	GAGA8HVBKN3	GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBR	Intron	15729
			Intron	15731
			Intron	15733
			Intron	15735
Motif_666	MYB binding site promoter	A flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genes	Upstream	-1014
Motif_69	CTRMCAMV35S	CT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGA	Intron	15729
			Intron	15731
			Intron	15733
			Intron	15735
			Intron	15737
			Intron	15739
			Intron	15741
Motif_98	SEF3MOTIFGM	SEF3 binding site; Soybean consensus sequence found in the 5' upstream region of beta-conglycinin (7S globulin) gene; AACCCA(-27bp-)AACCCA; SEF=soybean embryo factor; SEF2; SEF3; SEF4	Upstream	-1010