View conserved binding sites


Gene
GM10G40870
Description
Cinnamyl alcohol dehydrogenase
Alias
Glyma10g40870;Glyma10g40870.1;PAC:26346241;Glyma10g40870.1
Binding siteNameDescriptionLocationPosition
Matrix_127AtMYB15More than 80R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-177
Matrix_130TCP16Not availableUpstream-167
Upstream-1215
Upstream-1531
Matrix_166TGA4Not availableUpstream-1797
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-177
Matrix_211MYB3Not availableUpstream-179
Upstream-180
Matrix_216TCP16Not availableUpstream-167
Upstream-1215
Matrix_227AT1G64620Not availableUpstream-976
Matrix_237MYB55Not availableUpstream-178
Upstream-179
Matrix_266TCP16Determinants of the DNA binding specificity of class I and class II TCP transcription factorsUpstream-167
Upstream-1215
Matrix_297TCP15Not availableUpstream-1216
Upstream-1488
Matrix_299PFG3Not availableUpstream-179
Upstream-180
Matrix_371MYB7;AtMYB6;AtMYB32;ATMYB4Not availableUpstream-180
Upstream-181
Upstream-1885
Matrix_427ZAT14Not availableDownstream2114
Matrix_510AtMYB84More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-177
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-1041
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroUpstream-180
Motif_22RYREPEATLEGUMINBOXRY repeat (CATGCAY) or legumin box found in seed-storage protein genes in legume such as soybeanUpstream-1034
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesUpstream-180
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesUpstream-180
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-1040
Motif_419MYB4 binding site motifNot availableUpstream-180
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisUpstream-180
Upstream-1157
Motif_511RYREPEATGMGY2RY repeat motif (CATGCAT); Present in the 5' region of the soybean glycinin gene (Gy2)Upstream-1034
Motif_575TATABOX3TATA box; TATA box found in the 5'upstream region of sweet potato sporamin A geneUpstream-498
Upstream-989
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-787
Upstream-930
Motif_640RYREPEATBNNAPARY repeat found in RY/G box (the complex containing the two RY repeats and the G-box) of napA gene in Brassica napus; Found between -78 and -50; Required for seed specific expression;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABREUpstream-1034
Motif_666MYB binding site promoterA flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genesUpstream-180