View conserved binding sites


Gene
GM10G36990
Description
Fructose-1,6-bisphosphatase class 1
Alias
Glyma10g36990;Glyma10g36990.1;PAC:26345420;Glyma10g36990.1
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-60
Matrix_109GBF3Not availableUpstream-60
Matrix_113ABI5Not availableUpstream-60
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-58
Upstream-87
Matrix_122ABF1;AREB2Not availableUpstream-60
Matrix_129ABF1Not availableUpstream-61
Matrix_134ABF1Not availableUpstream-61
Upstream-62
Matrix_145GBF4;AT5G44080Not availableUpstream-61
Upstream-62
Matrix_169E2F1Not availableUpstream-104
Matrix_192FHY3/FAR1Not availableUpstream-58
Matrix_194HYH;HY5Not availableUpstream-58
Matrix_214AP1Not availableUpstream-59
Matrix_251PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-60
Matrix_264ATAREB1Not availableUpstream-58
Upstream-61
Matrix_294MEE35Not availableUpstream-87
Matrix_296GBF2Not availableUpstream-61
Matrix_300bZIP68;bZIP16Not availableUpstream-61
Matrix_301PIL5Not availableUpstream-56
Matrix_331GBF1Not availableUpstream-60
Matrix_338AP2Not availableUpstream-58
Matrix_345POC1Not availableUpstream-58
Upstream-87
Matrix_356PRR5Not availableUpstream-58
Matrix_403BZR1Not availableUpstream-59
Matrix_443AGL15Not availableUpstream-59
Matrix_488ABF1Not availableUpstream-60
Matrix_55PIF3Not availableUpstream-60
Matrix_60AT1G01260;AT5G57150Not availableUpstream-61
Matrix_65POC1;PIL1Not availableUpstream-62
Matrix_7PIF4Not availableUpstream-61
Matrix_77PRR5Not availableUpstream-59
Matrix_82TCP17Not availableUpstream-87
Matrix_94TCP5Not availableUpstream-87
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-62
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-62
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-61
Upstream-62
Motif_244ABRE-like binding site motifNot availableUpstream-60
Upstream-62
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemUpstream-61
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-62
Motif_361SORLREP4ATone of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; Common in circadian-regulated promoters; Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-223
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-62
Motif_498SGBFGMGMAUX28bZIP proteins SGBF-1 and SGBF-2 binding site in soybean GmAux28 gene promoterUpstream-60
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-60
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-215
Motif_689ANAC092NAC Transcription Factor ORE1 and Senescence-Induced BIFUNCTIONAL NUCLEASE1 (BFN1) Constitute a Regulatory Cascade in ArabidopsisUpstream-1654
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-370
Upstream-372
Upstream-374
Motif_72GADOWNATSequence present in 24 genes in the GA-down regulated d1 cluster (106 genes) found in Arabidopsis seed germination; This motif is similar to ABREUpstream-60