Matrix_101 | ERF5 | Not available | Upstream | -2 |
Matrix_138 | RRTF1 | Not available | Upstream | -3 |
Matrix_147 | ERF3;AT1G80580 | Not available | Upstream | -31 |
| | | Upstream | -1046 |
Matrix_155 | RAP2.6;ERF110;ABR1 | Not available | Upstream | -3 |
Matrix_224 | ERF1 | Not available | Upstream | -3 |
| | | Upstream | -6 |
Matrix_232 | TCP23 | Not available | Intron | 15053 |
Matrix_252 | RAP2.6 | Not available | Upstream | -2 |
| | | Upstream | -5 |
Matrix_272 | DEAR4 | Not available | Upstream | -2 |
Matrix_288 | RAP2.3 | Not available | Upstream | -3 |
Matrix_295 | ERF1 | Not available | Upstream | -4 |
Matrix_321 | HRD | Not available | Upstream | -3 |
Matrix_326 | AT5G07310;Rap2.6L;AT5G61890 | Not available | Upstream | -3 |
Matrix_343 | AT2G33710 | Not available | Upstream | -2 |
| | | Upstream | -5 |
Matrix_355 | ERF10;ERF11 | Not available | Upstream | -3 |
Matrix_406 | ATERF-7 | Not available | Upstream | -4 |
| | | Upstream | -31 |
Matrix_42 | AT2G45680 | Not available | Intron | 15052 |
Matrix_426 | CRF1;CRF2 | Not available | Upstream | -3 |
Matrix_45 | DRN | Not available | Upstream | -31 |
Matrix_517 | ERF12 | Not available | Upstream | -1046 |
Matrix_86 | CRF5;CRF6;CRF4 | Not available | Upstream | -3 |
Motif_153 | MARABOX1 | A-box found in SAR(scaffold attachment region; or matrix attachment region, MAR) | Upstream | -427 |
Motif_313 | ERF1 BS in AtCHI-B | Core of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperature | Upstream | -4 |
Motif_321 | TATABOX5 | TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysis | Upstream | -428 |
Motif_342 | POLASIG1 | PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in Arabidopsis | Upstream | -427 |
| | | Upstream | -431 |
Motif_370 | TATABOX2 | TATA box; TATA box found in the 5'upstream region of pea legA gene; sporamin A of sweet potato; TATA box found in beta-phaseolin promoter; sequence and spacing of TATA box elements are critical for accurate initiation | Upstream | -269 |