View conserved binding sites


Gene
GM10G02210
Description
No description available
Alias
Glyma10g02210;Glyma10g02210.1;PAC:26346401;Glyma10g02210.1
Binding siteNameDescriptionLocationPosition
Matrix_104PINot availableUpstream-1012
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1012
Matrix_109GBF3Not availableUpstream-1014
Matrix_113ABI5Not availableUpstream-1014
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-1009
Upstream-1010
Matrix_120BEE2Not availableUpstream-1013
Matrix_122ABF1;AREB2Not availableUpstream-1012
Upstream-1013
Matrix_129ABF1Not availableUpstream-1013
Matrix_134ABF1Not availableUpstream-878
Upstream-1014
Matrix_14ZCW32;AT5G62610Not availableUpstream-1014
Matrix_145GBF4;AT5G44080Not availableUpstream-1014
Matrix_156POC1Not availableUpstream-1012
Upstream-1014
Matrix_192FHY3/FAR1Not availableUpstream-1014
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-1013
Matrix_214AP1Not availableUpstream-1011
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-1014
Matrix_247PIF3Not availableUpstream-1013
Matrix_264ATAREB1Not availableUpstream-1010
Matrix_296GBF2Not availableUpstream-1013
Upstream-1014
Matrix_300bZIP68;bZIP16Not availableUpstream-1013
Upstream-1014
Matrix_312ARF11;MP;ARF6;IAA21;ARF8;ARF4Not availableUpstream-166
Matrix_331GBF1Not availableUpstream-1014
Matrix_332SPT;ALCNot availableUpstream-1013
Upstream-1014
Matrix_338AP2Not availableUpstream-1010
Matrix_345POC1Not availableUpstream-1009
Upstream-1010
Matrix_356PRR5Not availableUpstream-272
Upstream-1006
Matrix_403BZR1Not availableUpstream-1011
Matrix_443AGL15Not availableUpstream-1011
Matrix_55PIF3Not availableUpstream-1012
Matrix_64PIF5Not availableUpstream-1014
Matrix_7PIF4Not availableUpstream-1015
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1014
Motif_200GBOXLERBCSG box; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato and Arabidopsis; Binding with GBFUpstream-1013
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-1013
Upstream-1014
Upstream-1475
Motif_244ABRE-like binding site motifNot availableUpstream-274
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-1014
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-276
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-1013
Upstream-1014
Motif_473ABREOSRGA1ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxiaUpstream-1013
Motif_489SORLREP3ATone of Sequences Over-Represented in Light-Repressed Promoters (SORLREPs) in Arabidopsis; Computationally identified phyA-repressed motifs; See also all SORLREPs and also all SORLIPs;Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-365
Motif_536TBOXATGAPBTbox found in the Arabidopsis thaliana GAPB gene promoter; Located between -94 and -89 (T1) and also between -84 and -79 (T2); Mutations in the Tbox resulted in reductions of light-activated gene transcription; GAPB encodes the B subunit of chloroplast glyceraldehyde-3-phosphate dehydrogenase(GADPH) of A.T.; Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thalianaUpstream-1288
Upstream-1901
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-1015
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-274
Upstream-1015
Motif_638ABRE binding site motifNot availableUpstream-1014