View conserved binding sites


Gene
GM08G47900
Description
14-3-3-like protein
Alias
Glyma08g47900;Glyma08g47900.1;PAC:26306709;Glyma08g47900.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-638
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-627
Matrix_113ABI5Not availableUpstream-627
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-625
Matrix_120BEE2Not availableUpstream-628
Matrix_129ABF1Not availableUpstream-628
Upstream-629
Matrix_14ZCW32;AT5G62610Not availableUpstream-628
Upstream-629
Matrix_148WRKY60Not availableUpstream-669
Matrix_150UNE10;PIF7Not availableUpstream-629
Matrix_153AP2Not availableUpstream-627
Matrix_156POC1Not availableUpstream-627
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableUpstream-628
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-631
Matrix_194HYH;HY5Not availableUpstream-625
Matrix_197NAPNot availableUpstream-670
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableUpstream-628
Matrix_202WRKY71;WRKY28;WRKY8Not availableUpstream-670
Matrix_207WRKY10;WRKY57;AT2G44745;ATWRKY13;WRKY49Not availableUpstream-670
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-625
Matrix_220WRKY18Not availableUpstream-670
Matrix_23ANAC46Not availableUpstream-640
Matrix_233MYC3Not availableUpstream-629
Matrix_235WRKY67;WRKY64;WRKY63;WRKY66Not availableUpstream-671
Matrix_247PIF3Not availableUpstream-628
Matrix_249WRKY11Not availableUpstream-669
Matrix_261ATERF-1Not availableUpstream-638
Matrix_263WRKY33;WRKY19;WRKY32Not availableUpstream-670
Matrix_264ATAREB1Not availableUpstream-625
Upstream-626
Upstream-628
Upstream-629
Matrix_27ATAIB;ATNIG1Not availableUpstream-629
Matrix_289WRKY25Not availableUpstream-671
Matrix_293WRKY38Not availableUpstream-669
Matrix_301PIL5Not availableUpstream-623
Matrix_314WRKY65;WRKY14;WRKY35;WRKY69;WRKY16;ATWRKY52Not availableUpstream-669
Matrix_315MYB111Not availableUpstream-694
Matrix_316WRKY15;WRKY39;WRKY7;WRKY74Not availableUpstream-669
Matrix_320MYC4Not availableUpstream-629
Matrix_323BIM3Not availableUpstream-628
Matrix_325WRKY4;WRKY3;WRKY58;ATWRKY34;WRKY20;ATWRKY2Not availableUpstream-671
Matrix_329WRKY12Not availableUpstream-669
Matrix_330MYC2;TT8Not availableUpstream-628
Matrix_332SPT;ALCNot availableUpstream-628
Upstream-629
Matrix_338AP2Not availableUpstream-625
Matrix_339bHLH104Not availableUpstream-628
Matrix_345POC1Not availableUpstream-625
Matrix_356PRR5Not availableUpstream-625
Upstream-626
Matrix_357WRKY61;WRKY6;WRKY9;WRKY36;WRKY47;WRKY42;WRKY31;WRKY72Not availableUpstream-669
Matrix_365AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1Not availableUpstream-629
Matrix_368ATWRKY56;WRKY45;WRKY75;WRKY24Not availableUpstream-671
Matrix_369AT2G18300Not availableUpstream-626
Upstream-628
Matrix_370WRKY50;WRKY51Not availableUpstream-670
Matrix_371MYB7;AtMYB6;AtMYB32;ATMYB4Not availableUpstream-635
Matrix_376WRKY45Not availableUpstream-669
Matrix_389ILR3Not availableUpstream-628
Matrix_396AP3Not availableUpstream-488
Matrix_401MYB55Not availableUpstream-634
Matrix_403BZR1Not availableUpstream-626
Matrix_415WRKY27Not availableUpstream-670
Matrix_416ASL5Not availableUpstream-638
Matrix_437MYC2Not availableUpstream-629
Matrix_443AGL15Not availableUpstream-626
Upstream-627
Matrix_449BIM2Not availableUpstream-628
Matrix_452MYB46Not availableUpstream-634
Matrix_455MYB111Not availableUpstream-634
Matrix_465MYC4Not availableUpstream-628
Matrix_476bHLH115;bHLH34Not availableUpstream-629
Matrix_480BES1Not availableUpstream-628
Matrix_488ABF1Not availableUpstream-627
Upstream-628
Matrix_500WRKY43Not availableUpstream-669
Matrix_510AtMYB84More than 80 R2R3-MYB regulatory genes in the genome of Arabidopsis thalianaUpstream-631
Upstream-632
Matrix_53MYC3Not availableUpstream-630
Matrix_55PIF3Not availableUpstream-627
Matrix_58WRKY55;ATWRKY54;WRKY46;WRKY70;AtWRKY41;WRKY53;WRKY30Not availableUpstream-668
Matrix_60AT1G01260;AT5G57150Not availableUpstream-629
Matrix_64PIF5Not availableUpstream-629
Matrix_65POC1;PIL1Not availableUpstream-630
Matrix_7PIF4Not availableUpstream-628
Matrix_75WRKY29Not availableUpstream-670
Matrix_77PRR5Not availableUpstream-626
Matrix_80BIM1Not availableUpstream-627
Matrix_91CRF3Not availableUpstream-638
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-629
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-630
Motif_183TRANSINITDICOTSContext sequence of translational initiation codon in dicotsUpstream-623
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-630
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-629
Upstream-630
Motif_243TELOBOXATEEF1AA1telo-box (telomere motif) found in the Arabidopsis (A.t.) eEF1AA1 gene promoter; Conserved in all known plant eEF1A gene promoters; Found in the 5' region of numerous genes encoding components of the translational apparatus; Required for the activation of expression in root primordia; Acts co-operatively with tef-box; Binding site of AtPur alpha-1; Plant interstitial telomere mitifs participate in the control of gene expression in root meristemsUpstream-488
Motif_249DPBF1&2 binding site motifA novel class of bZIP transcription factors, DPBF-1 and 2 (Dc3 promoter-binding factor-1 and 2) binding core sequence; Found in the carrot Dc3 gene promoter; Dc3 expression is normally embryo-specific, and also can be induced by ABA; The Arabidopsis abscisic acid response gene ABI5 encodes a bZIP transcription factor; abi5 mutant have a pleiotropic defects in ABA response; ABI5 regulates a subset of late embryogenesis-abundant genes; GIA1 (growth-insensitivity to ABA) is identical to ABI5; Isolation of a novel class of bZIP transcription factors that interact with ABA-responsive and embryo-specification elements in the Dc3 promoter using a modified yeast one-hybrid systemUpstream-77
Upstream-303
Upstream-763
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-630
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-630
Motif_495TRANSINITMONOCOTSContext sequence of translational initiation codon in monocotsUpstream-623
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-310
Upstream-881
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-331
Motif_666MYB binding site promoterA flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genesUpstream-694
Motif_682GT1GMSCAM4GT-1 motif found in the promoter of soybean CaM isoform, SCaM-4; Plays a role in pathogen- and salt-induced SCaM-4 gene expressionUpstream-331
Motif_83CIACADIANLELHCRegion necessary for circadian expression of tomato Lhc geneUpstream-198
Upstream-286
Motif_92ABREATRD22ABRE (ABA responsive element) in Arabidopsis dehydration-responsive gene rd22Upstream-629