View conserved binding sites


Gene
GM08G07880
Description
b binding protein CP24 10A, chloroplastic
Alias
Glyma08g07880;Glyma08g07880.1;PAC:26309344;Glyma08g07880.1
Binding siteNameDescriptionLocationPosition
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-217
Upstream-218
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorUpstream-215
Upstream-216
Matrix_129ABF1Not availableUpstream-218
Upstream-219
Matrix_145GBF4;AT5G44080Not availableUpstream-219
Upstream-220
Matrix_156POC1Not availableUpstream-217
Upstream-218
Upstream-219
Upstream-220
Matrix_19PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingUpstream-218
Matrix_214AP1Not availableUpstream-216
Upstream-217
Matrix_233MYC3Not availableUpstream-219
Upstream-220
Matrix_247PIF3Not availableUpstream-218
Upstream-219
Matrix_296GBF2Not availableUpstream-218
Upstream-219
Upstream-220
Matrix_300bZIP68;bZIP16Not availableUpstream-218
Upstream-219
Upstream-220
Matrix_301PIL5Not availableUpstream-219
Upstream-220
Matrix_305PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-216
Upstream-217
Matrix_332SPT;ALCNot availableUpstream-218
Upstream-219
Upstream-220
Matrix_345POC1Not availableUpstream-215
Upstream-216
Matrix_359FLCNot availableUpstream-216
Upstream-217
Matrix_403BZR1Not availableUpstream-216
Upstream-217
Matrix_443AGL15Not availableUpstream-216
Upstream-217
Matrix_55PIF3Not availableUpstream-217
Upstream-218
Matrix_60AT1G01260;AT5G57150Not availableUpstream-219
Upstream-220
Matrix_64PIF5Not availableUpstream-219
Upstream-220
Matrix_65POC1;PIL1Not availableUpstream-219
Upstream-220
Motif_125BOXIINTPATPBBox II found in the tobacco plastid atpB gene promoter; Conserved in several NCII (nonconsensus type II) promoters of plastid genes; Important for the activity of this NCII promoterUpstream-136
Motif_127SBOXATRBCSS-box conserved in several rbcS promoters in Arabidopsis; ABI4 binding site; Important for the sugar and ABA responsiveness of CMA5Upstream-229
Motif_163BOXCPSAS1Box C in pea (P.s.) asparagine synthetase (AS1) gene; Found at -45; AS1 is negatively regulated by light; Box C binds with nuclear proteins, which was competed by a putative repressor element RE1Upstream-81
Motif_165AP3SV40AP-3 binding site consensus sequence in enhancer regions of SV40, MMTV, MLV, IL2Upstream-236
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-220
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Upstream-175
Upstream-220
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-219
Upstream-220
Motif_244ABRE-like binding site motifNot availableUpstream-218
Upstream-220
Motif_332SV40COREENHANSV40 core enhancer; Similar sequences found in rbcS genesUpstream-235
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureUpstream-220
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-219
Upstream-220
Motif_473ABREOSRGA1ABRE (ABA responsive element) in rice RGA1 encoding a G protein alpha subunit;ABRE; ABA and water-stress responses; Found in maize rab28; maize rab28 is ABA-inducible in embryos and vegetative tissues; Found in the Arabidopsis (A.t.) alcohol dehydrogenase (Adh) gene promoter; ABRE2; Found in the maize (Z.m.) Cat1 gene promoter; Responsible for the induction by ABA; Binding site of CBF2; Arabidopsis CBF1 overexpression induces COR genes and enhances freezing tolerance; The CBF genes do not appear to be autoregulated through the CRT/DRE sequence;The cis-regulatory element CCACGTGG is involved in ABA and water-stress responses of the maize gene rab28. Characterization of a maize G-box binding factor that is induced by hypoxiaUpstream-219
Motif_628TATCCAOSAMYTATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2Upstream-159
Upstream-577
Upstream-681
Upstream-823
Upstream-1562
Upstream-1784
Motif_70CANBNNAPACore of (CA)n element in storage protein genes in Brasica napus; embryo- and endosperm-specific transcription of napin (storage protein) gene, napA; seed specificity; activator and repressorUpstream-971