View conserved binding sites


Gene
GM08G07670
Description
Tobamovirus multiplication protein 1
Alias
Glyma08g07670;Glyma08g07670.1;PAC:26308076;Glyma08g07670.1
Binding siteNameDescriptionLocationPosition
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-143
Matrix_109GBF3Not availableUpstream-143
Matrix_122ABF1;AREB2Not availableUpstream-142
Matrix_128TGA2Not availableUpstream-192
Matrix_134ABF1Not availableUpstream-142
Matrix_139OBF5Not availableUpstream-191
Matrix_156POC1Not availableUpstream-143
Matrix_192FHY3/FAR1Not availableUpstream-145
Matrix_217BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-145
Matrix_228TGA2Not availableUpstream-193
Matrix_24POC1Not availableUpstream-146
Matrix_264ATAREB1Not availableUpstream-189
Matrix_269FHY3/FAR1Not availableUpstream-76
Upstream-73
Upstream-70
Matrix_282bZIP60Not availableUpstream-193
Matrix_296GBF2Not availableUpstream-196
Matrix_300bZIP68;bZIP16Not availableUpstream-196
Matrix_301PIL5Not availableUpstream-141
Matrix_311TGA1Not availableUpstream-192
Matrix_331GBF1Not availableUpstream-197
Matrix_332SPT;ALCNot availableUpstream-142
Matrix_403BZR1Not availableUpstream-188
Matrix_419TGA9;PAN;TGA6;bZIP65Not availableUpstream-192
Matrix_432AT1G77920Not availableUpstream-192
Matrix_438AtbZIP63Not availableUpstream-142
Matrix_55PIF3Not availableUpstream-143
Matrix_7PIF4Not availableUpstream-142
Matrix_77PRR5Not availableUpstream-143
Matrix_8KAN1Not availableUpstream-203
Matrix_80BIM1Not availableUpstream-141
Motif_131P1BSPHR1-binding sequence found in the upstream regions of phosphate starvation responsive genes from several plant species; phr1 (phosphate starvation response 1) gene codes for PHR1 protein related to PSR1 gene in C. reinhardtiiUpstream-202
Motif_291ABFs binding site motifBinding site of trans-acting factor EMBP-1; wheat Em gene;Binding site of ABFs; ABFs (ABRE binding factors) were isolated from Arabidopsis by a yeast one-hybrid screening system; Expression ABFs is induced by ABA and various stress treatment; ABFs belongs to a distinct subfamily of bZIP proteins; Involved in ABA-mediated stress-signaling pathway;A plant leucine zipper protein that recognizes an abscisic acid response elementUpstream-142
Motif_33ACGTCBOXC-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding siteUpstream-191
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-209
Motif_448IRO2OSOsIRO2-binding core sequence; G-box plus G; Transcription factor OsIRO2 is induced exclusively by Fe deficiencyUpstream-141
Motif_453HEXMOTIFTAH3H4hexamer motif found in promoter of wheat histone genes H3 and H4; CaMV35S; NOS; Binding with HBP-1A and HBP-1B; Binding site of wheat nuclear protein HBP-1 (histone DNA binding protein-1); HBP-1 has a leucine zipper motif; hexamer motif in type 1 element may play important roles in regulation of replication- dependent but not of replication-independent expression of the wheat histone H3 gene;Rice OBF1-homodimer-binding siteUpstream-190
Motif_459SORLIP1Identification of key promoter motifs involved in the network of light-regulated gene expression by combined analysis of genomic sequence and microarray dataUpstream-143
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaUpstream-186
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-1414
Motif_549TBF1The HSF-like transcription factor TBF1 is a major molecular switch for plant growth-to-defense transitionUpstream-76
Upstream-73
Upstream-70
Motif_558BOXIIPCCHSCore of Box II/G box found in the parsley chs genes; Essential for light regulationUpstream-142
Motif_563PYRIMIDINEBOXOSRAMY1APyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this siteUpstream-88
Motif_576TGACGTVMAMYTGACGT motif found in the Vigna mungo alpha-Amylase (Amy) gene promoter; Located between -128 and -123; Required for high level expression of alpha-Amylase in the cotyledons of the germinated seedsUpstream-190
Motif_627ACGTABREMOTIFA2OSEMExperimentally determined sequence requirement of ACGT-core of motif A in ABRE of the rice gene, OSEM; DRE and ABRE are interdependent in the ABA-responsive expression of the rd29A in ArabidopsisUpstream-142
Motif_638ABRE binding site motifNot availableUpstream-142