View conserved binding sites


Gene
GM07G33840
Description
Probable E3 ubiquitin ligase SUD1
Alias
Glyma07g33840;Glyma07g33840.3;PAC:26350621;Glyma07g33840.3
Binding siteNameDescriptionLocationPosition
Matrix_109GBF3Not availableUpstream-269
Matrix_244DREB2CNot availableUpstream-39
Matrix_331GBF1Not availableUpstream-269
Matrix_385DEAR4Not availableUpstream-39
Matrix_394DREB_UNot availableUpstream-39
Matrix_438AtbZIP63Not availableUpstream-268
Matrix_454AT1G77200;ATERF38;AT4G16750;AT5G52020Not availableUpstream-39
Matrix_456bZIP60Not availableUpstream-268
Matrix_56BZIP17;BZIP28;BZIP49Not availableUpstream-267
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-1405
Matrix_92AT1G33760Not availableUpstream-39
Motif_174SREATMSDsugar-repressive element (SRE) found in 272 of the 1592 down-regulated genes after main stem decapitation in ArabidopsisUpstream-624
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-267
Motif_318CGCGBOXATCGCG box recognized by AtSR1-6 (Arabidopsis thaliana signal-responsive genes); Multiple CGCG elements are found in promoters of many genes; Ca2+/calmodulin binds to all AtSRsUpstream-1443
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisUpstream-497
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisUpstream-496
Motif_371DRE-like promoter motifThe Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental StressesUpstream-37
Motif_454DRECRTCOREATCore motif of DRE/CRT (dehydration-responsive element/C-repeat) cis-acting element found in many genes in Arabidopsis and in rice; Os DREB1A bound to GCCGAC more preferentially than to ACCGAC whereas At DREB1A bound to both GCCGAC and ACCGAC efficiently; Maize ZmDREB1A bound to DRE; HaDREB2 in Helianthus annuus (sunflower)Upstream-37
Motif_591CBFHVBinding site of barley CBF1, and also of barley CBF2; CBF = C-repeat (CRT) binding factors; CBFs are also known as dehydration-responsive element (DRE) binding proteins (DREBs)Upstream-37
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-499
Motif_643DRE2COREZMRAB17DRE2 core found in maize rab17 gene promoter; DBF1 and DBF2 bound to DRE2; rab17 is expressed during late embryogenesis, and is induced by ABAUpstream-37