View conserved binding sites


Gene
GM07G08710
Description
Transcription factor TCP9
Alias
Glyma07g08710;Glyma07g08710.2;PAC:26350536;Glyma07g08710.2
Binding siteNameDescriptionLocationPosition
Matrix_106AT5G47390Not availableUpstream-495
Matrix_108PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesDownstream1090
Downstream1098
Matrix_118PIF3_2Direct targeting of light signals to a promoter element-bound transcription factorDownstream1088
Downstream1126
Matrix_120BEE2Not availableDownstream1091
Matrix_130TCP16Not availableDownstream1178
Matrix_14ZCW32;AT5G62610Not availableDownstream1091
Downstream1092
Matrix_144AT5G08330;AT5G23280Not availableUpstream-299
Matrix_15PIF3_1Direct targeting of light signals to a promoter element-bound transcription factorDownstream1087
Downstream1095
Matrix_153AP2Not availableDownstream1090
Downstream1098
Matrix_156POC1Not availableDownstream1098
Matrix_158AT1G03040;LRL1;UNE12;LRL2;LRL3Not availableDownstream1091
Matrix_196TCP20;AT5G41030Not availableUpstream-296
Downstream1122
Downstream1174
Matrix_200PIL5;AT4G28790;AT4G28800;AT4G28811;AT4G28815Not availableDownstream1091
Matrix_233MYC3Not availableDownstream1092
Matrix_24POC1Not availableDownstream1087
Downstream1095
Matrix_294MEE35Not availableUpstream-1249
Matrix_297TCP15Not availableUpstream-297
Downstream1123
Downstream1175
Matrix_301PIL5Not availableDownstream1086
Matrix_305PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-1443
Matrix_316WRKY15;WRKY39;WRKY7;WRKY74Not availableDownstream1149
Matrix_320MYC4Not availableDownstream1092
Matrix_323BIM3Not availableDownstream1091
Downstream1099
Matrix_325WRKY4;WRKY3;WRKY58;ATWRKY34;WRKY20;ATWRKY2Not availableDownstream1149
Matrix_330MYC2;TT8Not availableDownstream1091
Downstream1099
Matrix_332SPT;ALCNot availableDownstream1092
Downstream1099
Matrix_339bHLH104Not availableDownstream1091
Matrix_345POC1Not availableDownstream1126
Matrix_348AT5G51910Not availableUpstream-299
Upstream-298
Downstream1176
Matrix_365AT1G10120;AT1G25330;CIB5;AT1G68920;AT3G23690;CIB1Not availableDownstream1092
Downstream1100
Matrix_369AT2G18300Not availableDownstream1089
Downstream1091
Downstream1097
Matrix_389ILR3Not availableDownstream1091
Matrix_42AT2G45680Not availableUpstream-299
Upstream-298
Matrix_437MYC2Not availableDownstream1092
Matrix_449BIM2Not availableDownstream1091
Downstream1099
Matrix_465MYC4Not availableDownstream1091
Downstream1099
Matrix_476bHLH115;bHLH34Not availableDownstream1092
Matrix_480BES1Not availableDownstream1091
Downstream1099
Matrix_500WRKY43Not availableDownstream1149
Matrix_507TCP3Not availableUpstream-300
Downstream1126
Matrix_53MYC3Not availableDownstream1093
Downstream1097
Matrix_64PIF5Not availableDownstream1100
Matrix_80BIM1Not availableDownstream1090
Downstream1092
Downstream1098
Downstream1100
Matrix_82TCP17Not availableUpstream-1249
Downstream1127
Matrix_90BEE1;BEE3;AT3G07340;AT5G48560;AT5G50915Not availableDownstream1092
Motif_116INRNTPSADBInr (initiator) elements found in the tobacco psaDb gene promoter without TATA boxes; Light-responsive transcription of psaDb depends on Inr, but not TATA boxUpstream-186
Motif_139RHERPATEXPA7Right part of RHEs (Root Hair-specific cis-Elements) conserved among the Arabidopsis thaliana A7 (AtEXPA7) orthologous (and paralogous) genes from diverse angiosperm species with different hair distribution patternsUpstream-289
Downstream1092
Downstream1094
Downstream1100
Downstream1102
Motif_179CACGTGMOTIF;BES1;PIF4;PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling;A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thaliana; CACGTG motif; G-box; Binding site of Arabidopsis GBF4; C. roseus G-box binding factor 1 (CrGBF1) and 1 (CrGBF2) can act as transcriptional repressors of the Str promoter via direct interaction with the G-box; Essential for expression of beta-phaseolin gene during embryogenesis in bean, tobacco, Arabidopsis; Tomato Pti4 (ERF) regulates defense-related gene expression via GCC box and non-GCC box cis-element (Myb1 (GTTAGTT) and G-box (CACGTG)); Isolation and characterization of a fourth Arabidopsis thaliana G-box-binding factor, which has similarities to Fos oncoprotein; Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesDownstream1093
Downstream1101
Motif_194EBOXBNNAPAE-box of napA storage-protein gene of Brassica napus;This sequence is also known as RRE (R response element); MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see E-box and MYCATRD22; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regulates the transcription of CBF/DREB1 genes in the cold in Arabidopsis; ICE1Downstream1093
Downstream1101
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREDownstream1092
Downstream1093
Downstream1100
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisDownstream1150
Motif_33ACGTCBOXC-box according to the nomenclature of ACGT elements; One of ACGT elements; Factors groups 1, 2 and 3 have affinity for C-box;RITA-1 binding siteDownstream1064
Motif_339ABRE-like binding site motifMolecular responses to dehydration and low temperatureDownstream1093
Downstream1101
Motif_48BES1A brassinosteroid transcriptional network revealed by genome-wide identification of BESI target genes in Arabidopsis thalianaDownstream1095
Downstream1099
Motif_552MRE1MRE (metal responsive element); Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1Downstream1096
Downstream1097
Motif_57ABREOSRAB21ABA responsive element (ABRE) of wheat Em and rice rab21 genes; Proposed consensus sequence for the repeated motif (Em1a and Em1b) of wheat Em geneDownstream1094
Downstream1098
Motif_603SITEIIATCYTCSite II element found in the promoter regions of cytochrome genes (Cytc-1, Cytc-2) in Arabidopsis; Located between -147 and -156 from the translational starts sites;Overrepresented in the promoters of nuclear genes encoding components of the oxidative phosphorylation (OxPhos) machinery from both Arabidopsis and riceUpstream-298