View conserved binding sites


Gene
GM06G47910
Description
Chloride channel protein CLC-f
Alias
Glyma06g47910;Glyma06g47910.1;PAC:26298342;Glyma06g47910.1
Binding siteNameDescriptionLocationPosition
Matrix_456bZIP60Not availableUpstream-205
Motif_171TCP binding consensusfound enriched in peaks in chip-seq data for SEP3Upstream-852
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-248
Motif_520AMYBOX1amylase box; Conserved sequence found in 5'-upstream region of alpha-amylase gene of rice, wheat, barleyUpstream-636
Upstream-868
Motif_614MYBGAHVCentral element of gibberellin (GA) response complex (GARC) in high-pI alpha-amylase gene in barley; Similar to c-myb and v-myb consensus binding site; GAmyb binds specifically to the TAACAAA box in vitro; GAmyb is the sole GA-regulated transcriptional factor required for transcriptional activation of the high-pI alpha-amylase; GARC consist of the pyrimidine, TAACAAA and TATCCAC boxes; GARE in RAmy1A gene; GARE and pyrimidine box in RAmy1A are partially involved in sugar repressionUpstream-636
Upstream-868
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Upstream-412
Upstream-413
Upstream-693
Upstream-776
Upstream-792
Upstream-821
Upstream-824
Motif_667TATABOXOSPALBinding site for OsTBP2, found in the promoter of rice pal gene encoding phenylalanine ammonia-lyase; OsTFIIB stimulated the DNA binding and bending activities of OsTBP2 and synergistically enhanced OsTBP2-mediated transcription from the pal promoterUpstream-807
Upstream-830