View conserved binding sites


Gene
GM06G36190
Description
Transcription factor
Alias
Glyma06g36190;Glyma06g36190.1;PAC:26302320;Glyma06g36190.1
Binding siteNameDescriptionLocationPosition
Matrix_179AtMYB84;MYB36;MYB68;O49746_ARATHNot availableUpstream-173
Matrix_181Dof5.7Not availableUpstream-425
Upstream-426
Matrix_19PIF5Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signalingIntron2069
Intron955
Intron238
Matrix_315MYB111Not availableIntron967
Intron966
Matrix_371MYB7;AtMYB6;AtMYB32;ATMYB4Not availableIntron966
Intron965
Matrix_414AGL15Not availableUpstream-433
Matrix_48PINot availableUpstream-432
Motif_1GT1CORECritical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complexUpstream-404
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-2
Upstream-4
Upstream-6
Upstream-8
Upstream-10
Upstream-12
Upstream-14
Upstream-16
Upstream-18
Upstream-20
Upstream-22
Upstream-24
Upstream-26
Upstream-28
Upstream-30
Upstream-32
Upstream-34
Upstream-36
Upstream-38
Upstream-40
Upstream-42
Upstream-44
Upstream-46
Upstream-48
Upstream-50
Upstream-52
Upstream-54
Upstream-56
Upstream-58
Upstream-60
Upstream-62
Upstream-64
Upstream-66
Upstream-68
Upstream-70
Upstream-72
Upstream-74
Upstream-76
Upstream-78
Upstream-80
Upstream-82
Upstream-84
Upstream-86
Upstream-88
Upstream-90
Upstream-92
Upstream-94
Upstream-96
Upstream-98
Upstream-100
Upstream-102
Upstream-104
Upstream-106
Upstream-108
Upstream-110
Upstream-112
Upstream-114
Upstream-116
Upstream-118
Upstream-120
Upstream-122
Upstream-124
Upstream-126
Upstream-128
Upstream-130
Motif_192BOXLCOREDCPALConsensus of the putative core sequences of box-L-like sequences in carrot; PAL1 promoter region; DCMYB1 bound to these sequences in vitroIntron965
Motif_254MYB46;MYB83MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genesIntron965
Motif_292MYBPZMCore of consensus maize P (myb homolog) binding site; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genesIntron964
Motif_410ANAERO1CONSENSUSOne of 16 motifs found in silico in promoters of 13 anaerobic genes involved in the fermentative pathway (anaerobic set 1); Arbitrary named ANAERO1CONSENSUS by the PLACEdb curatorUpstream-386
Motif_419MYB4 binding site motifNot availableIntron965
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-2
Upstream-4
Upstream-6
Upstream-8
Upstream-10
Upstream-12
Upstream-14
Upstream-16
Upstream-18
Upstream-20
Upstream-22
Upstream-24
Upstream-26
Upstream-28
Upstream-30
Upstream-32
Upstream-34
Upstream-36
Upstream-38
Upstream-40
Upstream-42
Upstream-44
Upstream-46
Upstream-48
Upstream-50
Upstream-52
Upstream-54
Upstream-56
Upstream-58
Upstream-60
Upstream-62
Upstream-64
Upstream-66
Upstream-68
Upstream-70
Upstream-72
Upstream-74
Upstream-76
Upstream-78
Upstream-80
Upstream-82
Upstream-84
Upstream-86
Upstream-88
Upstream-90
Upstream-92
Upstream-94
Upstream-96
Upstream-98
Upstream-100
Upstream-102
Upstream-104
Upstream-106
Upstream-108
Upstream-110
Upstream-112
Upstream-114
Upstream-116
Upstream-118
Upstream-120
Upstream-122
Upstream-124
Upstream-126
Upstream-128
Upstream-130
Upstream-132
Motif_51MYB46Identification of a cis-acting regulatory motif recognized by MYB46, a master transcriptional regulator of secondary wall biosynthesisIntron966
Motif_609AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-386
Motif_658GT1CONSENSUSConsensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expressionUpstream-424
Motif_666MYB binding site promoterA flower-specific Myb protein activates transcription of phenylpropanoid biosynthetic genesIntron966
Motif_672AP2The floral homeotic protein APETALA2 recognizes and acts through an AT-rich sequence elementUpstream-386
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAIntron163
Intron161
Upstream-2
Upstream-4
Upstream-6
Upstream-8
Upstream-10
Upstream-12
Upstream-14
Upstream-16
Upstream-18
Upstream-20
Upstream-22
Upstream-24
Upstream-26
Upstream-28
Upstream-30
Upstream-32
Upstream-34
Upstream-36
Upstream-38
Upstream-40
Upstream-42
Upstream-44
Upstream-46
Upstream-48
Upstream-50
Upstream-52
Upstream-54
Upstream-56
Upstream-58
Upstream-60
Upstream-62
Upstream-64
Upstream-66
Upstream-68
Upstream-70
Upstream-72
Upstream-74
Upstream-76
Upstream-78
Upstream-80
Upstream-82
Upstream-84
Upstream-86
Upstream-88
Upstream-90
Upstream-92
Upstream-94
Upstream-96
Upstream-98
Upstream-100
Upstream-102
Upstream-104
Upstream-106
Upstream-108
Upstream-110
Upstream-112
Upstream-114
Upstream-116
Upstream-118
Upstream-120
Upstream-122
Upstream-124
Upstream-126
Upstream-128
Upstream-130
Upstream-132
Upstream-134
Upstream-136
Upstream-138