View conserved binding sites


Gene
GM06G16260
Description
protein deacetylase SRT2
Alias
Glyma06g16260;Glyma06g16260.1;PAC:26300539;Glyma06g16260.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-117
Matrix_110ATABI4;AT3G57600Not availableUpstream-116
Matrix_119RRTF1Not availableUpstream-118
Matrix_138RRTF1Not availableUpstream-118
Matrix_146ORA47Not availableUpstream-117
Matrix_147ERF3;AT1G80580Not availableUpstream-119
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-118
Matrix_190ATERF1Not availableUpstream-116
Matrix_224ERF1Not availableUpstream-118
Matrix_234RAP2.3Not availableUpstream-117
Matrix_243RAP2.12;RAP2.2Not availableUpstream-118
Matrix_252RAP2.6Not availableUpstream-117
Matrix_261ATERF-1Not availableUpstream-118
Matrix_272DEAR4Not availableUpstream-117
Matrix_287ERF2Not availableUpstream-117
Matrix_288RAP2.3Not availableUpstream-118
Matrix_295ERF1Not availableUpstream-119
Matrix_305PIF4Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responsesUpstream-99
Matrix_321HRDNot availableUpstream-118
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-118
Matrix_334AT3G23230Not availableUpstream-118
Matrix_343AT2G33710Not availableUpstream-117
Matrix_355ERF10;ERF11Not availableUpstream-118
Matrix_360ORA59Not availableUpstream-119
Matrix_363RAP2.3Not availableUpstream-118
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-118
Matrix_378ATERF1Not availableUpstream-117
Matrix_401MYB55Not availableUpstream-43
Matrix_406ATERF-7Not availableUpstream-119
Matrix_409DEAR3Not availableUpstream-118
Matrix_426CRF1;CRF2Not availableUpstream-118
Matrix_45DRNNot availableUpstream-119
Matrix_462ATERF-8Not availableUpstream-119
Matrix_473RRTF1Not availableUpstream-117
Matrix_484ATERF13Not availableUpstream-119
Matrix_493AT1G22985;AT1G71130Not availableUpstream-118
Matrix_50ATERF14;AT5G43410Not availableUpstream-118
Matrix_506DRNL;ATERF-4Not availableUpstream-118
Matrix_517ERF12Not availableUpstream-119
Matrix_57WIN1;SHN3;SHN2Not availableUpstream-118
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-118
Matrix_91CRF3Not availableUpstream-118
Motif_141BP5OSWXOsBP-5 (a MYC protein) binding site in Wx promoterUpstream-102
Motif_163BOXCPSAS1Box C in pea (P.s.) asparagine synthetase (AS1) gene; Found at -45; AS1 is negatively regulated by light; Box C binds with nuclear proteins, which was competed by a putative repressor element RE1Upstream-44
Motif_218ABRERATCALABRE-related sequence or Repeated sequence motifs identified in the upstream regions of 162 Ca(2+)-responsive upregulated genes; see also ABREUpstream-101
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-120
Motif_563PYRIMIDINEBOXOSRAMY1APyrimidine box found in rice alpha-amylase (RAmy1A) gene; Gibberellin-respons cis-element of GARE and pyrimidine box are partially involved in sugar repression; Found in the promoter of barley alpha-amylase (Amy2/32b) gene which is induced in the aleurone layers in response to GA; BPBF protein binds specifically to this siteUpstream-61
Motif_567T/GBOXATPIN2T/G-box found in tomato proteinase inhibitor II (pin2) and leucine aminopeptidase (LAP) genes; Involved in jasmonate (JA) induction of these genes; bHLH-Leu zipper JAMYC2 and JAMYC10 proteins specifically recognize this motifUpstream-102
Motif_628TATCCAOSAMYTATCCA element found in alpha-amylase promoters of rice at positions ca.90 to 150bp upstream of the transcription start sites; Binding sites of OsMYBS1, OsMYBS2 and OsMYBS3 which mediate sugar and hormone regulation of alpha-amylase gene expression; See also AMYBOX2Upstream-785