View conserved binding sites


Gene
GM05G08270
Description
11-oxo-beta-amyrin 30-oxidase
Alias
Glyma05g08270;Glyma05g08270.1;PAC:26321250;Glyma05g08270.1
Binding siteNameDescriptionLocationPosition
Matrix_101ERF5Not availableUpstream-286
Matrix_102WRKY21Not availableUpstream-307
Matrix_119RRTF1Not availableUpstream-287
Matrix_138RRTF1Not availableUpstream-287
Matrix_146ORA47Not availableUpstream-286
Matrix_147ERF3;AT1G80580Not availableUpstream-286
Matrix_148WRKY60Not availableUpstream-308
Matrix_155RAP2.6;ERF110;ABR1Not availableUpstream-285
Matrix_17WRKY22Not availableUpstream-307
Matrix_190ATERF1Not availableUpstream-286
Upstream-285
Matrix_197NAPNot availableUpstream-307
Matrix_202WRKY71;WRKY28;WRKY8Not availableUpstream-307
Matrix_207WRKY10;WRKY57;AT2G44745;ATWRKY13;WRKY49Not availableUpstream-307
Matrix_220WRKY18Not availableUpstream-307
Matrix_224ERF1Not availableUpstream-287
Matrix_232TCP23Not availableUpstream-286
Matrix_234RAP2.3Not availableUpstream-286
Matrix_235WRKY67;WRKY64;WRKY63;WRKY66Not availableUpstream-306
Matrix_243RAP2.12;RAP2.2Not availableUpstream-285
Matrix_249WRKY11Not availableUpstream-308
Matrix_25AP3Not availableUpstream-357
Matrix_252RAP2.6Not availableUpstream-286
Matrix_261ATERF-1Not availableUpstream-286
Matrix_263WRKY33;WRKY19;WRKY32Not availableUpstream-307
Matrix_272DEAR4Not availableUpstream-286
Matrix_277RAP2.6Not availableUpstream-287
Matrix_280TCP24;TCP1;BRC2;ATTCP18Not availableUpstream-285
Matrix_287ERF2Not availableUpstream-286
Matrix_288RAP2.3Not availableUpstream-287
Matrix_293WRKY38Not availableUpstream-308
Matrix_295ERF1Not availableUpstream-286
Matrix_3WRKY48Not availableUpstream-307
Matrix_314WRKY65;WRKY14;WRKY35;WRKY69;WRKY16;ATWRKY52Not availableUpstream-308
Matrix_316WRKY15;WRKY39;WRKY7;WRKY74Not availableUpstream-308
Matrix_321HRDNot availableUpstream-286
Matrix_325WRKY4;WRKY3;WRKY58;ATWRKY34;WRKY20;ATWRKY2Not availableUpstream-306
Matrix_326AT5G07310;Rap2.6L;AT5G61890Not availableUpstream-287
Matrix_329WRKY12Not availableUpstream-308
Matrix_334AT3G23230Not availableUpstream-285
Matrix_343AT2G33710Not availableUpstream-286
Matrix_344ATERF15;AT4G18450Not availableUpstream-286
Matrix_355ERF10;ERF11Not availableUpstream-287
Matrix_357WRKY61;WRKY6;WRKY9;WRKY36;WRKY47;WRKY42;WRKY31;WRKY72Not availableUpstream-308
Matrix_360ORA59Not availableUpstream-286
Matrix_363RAP2.3Not availableUpstream-287
Matrix_370WRKY50;WRKY51Not availableUpstream-307
Matrix_374AT5G07580;AT5G61590Not availableUpstream-286
Matrix_376WRKY45Not availableUpstream-308
Matrix_377AT1G75490;DREB2C;AT2G40350;AT5G18450Not availableUpstream-286
Matrix_378ATERF1Not availableUpstream-286
Matrix_384ATWRKY17Not availableUpstream-307
Matrix_405DREB2CNot availableUpstream-285
Matrix_406ATERF-7Not availableUpstream-288
Matrix_415WRKY27Not availableUpstream-307
Matrix_426CRF1;CRF2Not availableUpstream-285
Matrix_462ATERF-8Not availableUpstream-288
Matrix_473RRTF1Not availableUpstream-286
Matrix_48PINot availableUpstream-255
Matrix_484ATERF13Not availableUpstream-286
Matrix_493AT1G22985;AT1G71130Not availableUpstream-286
Matrix_50ATERF14;AT5G43410Not availableUpstream-287
Matrix_500WRKY43Not availableUpstream-308
Matrix_506DRNL;ATERF-4Not availableUpstream-285
Matrix_58WRKY55;ATWRKY54;WRKY46;WRKY70;AtWRKY41;WRKY53;WRKY30Not availableUpstream-309
Matrix_59AT4G00238;AT4G00250Not availableUpstream-287
Matrix_75WRKY29Not availableUpstream-307
Matrix_78AT3G45610Not availableUpstream-272
Matrix_86CRF5;CRF6;CRF4Not availableUpstream-285
Matrix_91CRF3Not availableUpstream-286
Motif_1GT1CORECritical for GT-1 binding to box II of rbcS; Transcriptional activation by Arabidopsis GT-1 may be through interaction with TFIIA-TBP-TATA complexUpstream-261
Motif_129GAGAGMGSA1GAGA element found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean; GAGA binding protein (GBP) binds to (GA)n/(CT)n DNAUpstream-134
Upstream-132
Upstream-130
Upstream-128
Upstream-126
Motif_136SEF4MOTIFGM7SSEF4 binding site; Soybean consensus sequence found in 5'upstream region (-199) of beta-conglycinin (7S globulin) gene (Gmg17.1); Binding with SEF4 (soybean embryo factor 4)Upstream-1901
Motif_16-300ELEMENTPresent upstream of the promoter from the B-hordein gene of barley and the alpha-gliadin, gamma-gliadin, and low molecular weight glutenin genes of wheat; See S000001 -300CORE; See S000002 -300MOTIFIntron546
Motif_182MYB2CONSENSUSATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; see MYB2 and MYBATRD22Upstream-272
Motif_221MYBCOREBinding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesisUpstream-272
Motif_270ELRECOREPCRP1ElRE (Elicitor Responsive Element) core of parsley PR1 genes; consensus sequence of elements W1 and W2 of parsley PR1-1 and PR1-2 promoters; Box W1 and W2 are the binding site of WRKY1 and WRKY2, respectively; ERE; WA box; One of the W boxes found in the Parsley WRKY1 gene promoter; Required for elicitor responsiveness; WC box WB box and WC box constitute a palindrome; WRKY1 protein binding site; W-box found in thioredoxin h5 gene in ArabidopsisUpstream-305
Motif_279POLASIG3Plant polyA signal; Consensus sequence for plant polyadenylation signalUpstream-1892
Motif_286SEBFCONSSTPR10ABinding site of the potato silencing element binding factor (SEBF) gene found in promoter of pathogenesis-related gene (PR-10a); Located between -45 and -39; Similar to the auxin response elementUpstream-137
Motif_313ERF1 BS in AtCHI-BCore of GCC-box found in many pathogen-responsive genes such as PDF1.2, Thi2.1, and PR4; Has been shown to function as ethylene-responsive element; Appears to play important roles in regulating jasmonate-responsive gene expression; Tomato Pti4 (ERF) regulates defence-related gene expression via GCC box and non-GCC box cis elements (Myb1 (GTTAGTT) and G-box(CACGTG)); Nuclear events in ethylene signaling: a transcriptional cascade mediated by ETHYLENE-INSENSITIVE3 and ETHYLENE-RESPONSE-FACTOR1;Molecular responses to dehydration and low temperatureUpstream-285
Motif_321TATABOX5TATA box; TATA box found in the 5'upstream region of pea (Pisum sativum) glutamine synthetase gene; a functional TATA element by in vivo analysisIntron973
Motif_336MYBMOUSEBinding site for mouse c-myb proteinUpstream-272
Motif_342POLASIG1PolyA signal; poly A signal found in legA gene of pea, rice alpha-amylase; -10 to -30 in the case of animal genes. Near upstream elements (NUE) in ArabidopsisIntron974
Motif_365ARF1 binding site motifARF (auxin response factor) binding site found in the promoters of primary/early auxin response genes of Arabidopsis thaliana; AuxRE;Binding site of Arabidopsis ARF1 (Auxin response factor1); Sequence found in NDE element in Soybean SAUR (Small Auxin-Up RNA) 15A gene promoter;Found in D1 or D4 element in Soybean GH3 promoter; This element was enriched in the 5'-flanking region of genes up-regulated by both IAA and BL;Dimerization and DNA binding of auxin response factorsUpstream-136
Motif_391REALPHALGLHCB21REalpha found in Lemna gibba Lhcb21 gene promoter; Located at -134 to -129; Binding site of proteins of whole-cell extracts; The DNA binding activity is high in etiolated plants but much lower in green plants; Required for phytochrome regulationUpstream-263
Motif_421TAC1Regulation of telomerase in Arabidopsis by BT2, an apparent target of TELOMERASE ACTIVATOR1Upstream-141
Motif_441GAGA8HVBKN3GA octodinucleotide repeat found in intron IV of the barley gene Bkn3; Binding site for GAGA-binding factor BBRUpstream-134
Upstream-132
Upstream-130
Upstream-128
Upstream-126
Upstream-124
Motif_502MYB98The MYB98 subcircuit of the synergid gene regulatory network includes genes directly and indirectly regulated by MYB98Upstream-346
Motif_503EECCRCAH1EEC; Consensus motif of the two enhancer elements, EE-1 and EE-2, both found in the promoter region of the Chlamydomonas Cah1 (encoding a periplasmic carbonic anhydrase); Binding site of Myb transcription factor LCR1Upstream-295
Motif_606NAPINMOTIFBNSequence found in 5' upstream region (-6, -95, -188) of napin (2S albumin) gene in Brassica napus; Interact with a protein present in crude nuclear extracts from developing B. napus seedsUpstream-758
Motif_615MARTBOXT-Box; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR)Intron969
Motif_618MYB1ATMYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in ArabidopsisUpstream-262
Motif_640RYREPEATBNNAPARY repeat found in RY/G box (the complex containing the two RY repeats and the G-box) of napA gene in Brassica napus; Found between -78 and -50; Required for seed specific expression;dist B ABRE mediated transactivation by ABI3 adn ABI3-dependent response to ABA; a tetramer of the composite RY/G complex mediated only ABA-independent transactivation by ABI3; B2 domain of ABI3 is necessary for ABA-independent and ABA-dependent activation through the dist B ABREIntron597
Motif_69CTRMCAMV35SCT-rich motif (inverted GAGA) found in a 60-nucleotide region (S1) downstream of the transcription start site of the CaMV 35S RNA; Can enhance gene expression; Inverted GAGAUpstream-247
Upstream-134
Upstream-132
Upstream-130
Upstream-128
Upstream-126
Upstream-124
Upstream-122
Upstream-120
Upstream-118
Upstream-116